graphify_chase_ai — Complete Call Flow & Architecture Documentation

Generated from graphify knowledge graph: 6188 nodes, 11460 edges, 971 communities. Commit: unknown

Architecture Overview Extraction Pipeline Graph Build Analysis & Clustering Outputs & Docs CLI & Skill Installers Ingestion & Updates Serving API Security & Global Graph Tests & Fixtures Prs Semantic Cleanup Attention Notes Graphify Always On Agents Md Graphify Always On Antigravity Rules Other

1. Architecture Overview

Architecture Layers

Layer	Nodes	Communities
Extraction Pipeline	268	`1, 119, 139, 64, 192, 6, 468, 507, 511, 512, 457, 458, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 627, 630, 632, 813, 816, 819, 820, 821, 822, 832, 875, 876, 883, 930`
Graph Build	283	`62, 58, 38, 89, 132, 143, 108, 161, 168, 186, 187, 232, 242, 243, 244, 245, 246, 256, 257, 270, 406, 513, 514, 515, 516, 517, 93, 546, 559, 560, 768, 782, 810, 824, 830, 919`
Analysis & Clustering	284	`14, 27, 35, 11, 57, 90, 104, 142, 223, 229, 267, 275, 281, 770, 776, 784, 799`
Outputs & Docs	279	`52, 63, 49, 87, 103, 169, 240, 107, 145, 182, 170, 171, 205, 222, 228, 241, 506, 519, 520, 521, 522, 523, 808, 809, 833, 847`
CLI & Skill Installers	418	`37, 17, 5, 26, 56, 78, 111, 124, 153, 102, 216, 196, 200, 211, 46, 504, 266, 508, 274, 445, 446, 447, 448, 449, 450, 524, 545, 655, 656, 657, 658, 661, 667, 668, 670, 23, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 773, 774, 775, 777, 778, 787, 788, 789, 790, 791, 792, 793, 794, 826, 827, 894, 895, 896, 897, 898, 899, 901`
Ingestion & Updates	779	25, 65, 94, 100, 221, 82, 220, 121, 109, 148, 150, 194, 197, 198, 199, 210, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 480, 765, 771, 772, 779, 785, 786, 795, 828
Serving API	276	`29, 73, 83, 51, 55, 40, 71, 101, 129, 138, 218`
Security & Global Graph	117	`99, 70, 75, 942`
Tests & Fixtures	3382	21, 9, 12, 8, 16, 4, 18, 13, 34, 33, 36, 22, 42, 45, 50, 54, 43, 47, 32, 61, 0, 113, 30, 59, 60, 20, 128, 66, 69, 77, 126, 48, 74, 105, 7, 72, 80, 85, 96, 88, 91, 92, 81, 84, 117, 79, 98, 106, 110, 114, 130, 53, 86, 95, 115, 118, 122, 123, 156, 185, 97, 112, 116, 125, 131, 133, 134, 146, 15, 172, 3, 135, 136, 137, 141, 144, 157, 147, 149, 120, 152, 154, 155, 158, 159, 160, 162, 175, 176, 180, 163, 164, 165, 166, 167, 173, 174, 188, 207, 177, 178, 179, 181, 183, 184, 190, 10, 189, 191, 193, 217, 219, 195, 201, 202, 203, 204, 206, 208, 209, 249, 268, 39, 41, 212, 213, 214, 215, 260, 269, 224, 225, 226, 230, 271, 44, 231, 233, 234, 235, 236, 237, 238, 239, 247, 248, 452, 501, 502, 503, 227, 250, 251, 252, 253, 254, 255, 258, 259, 505, 67, 261, 262, 263, 264, 265, 272, 273, 509, 276, 277, 278, 279, 280, 510, 518, 19, 2, 24, 28, 31, 451, 453, 454, 455, 456, 459, 460, 461, 462, 463, 464, 465, 466, 467, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 628, 629, 631, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 659, 660, 662, 663, 664, 665, 666, 669, 671, 672, 673, 674, 675, 676, 677, 678, 679, 68, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 495, 797, 798, 800, 801, 802, 803, 804, 805, 806, 807, 839, 840, 841, 842, 843, 844, 845, 846, 848, 849, 850, 851, 852, 853, 854, 855, 856, 857, 858, 859, 860, 861, 862, 863, 864, 865, 866, 867, 868, 869, 870, 871, 872, 873, 874, 877, 878, 879, 880, 881, 882, 884, 885, 886, 887, 888, 889, 890, 891, 892, 893, 900, 902, 903, 904, 905, 906, 907, 908, 909, 910, 911, 912, 913, 914, 915, 916, 917, 918, 920, 921, 922, 923, 924, 925, 926, 927, 928, 929, 931, 932, 933, 934, 935, 936, 937, 938, 939, 940, 941, 943, 944, 945, 946, 947, 948, 949, 950, 951, 952, 953
Prs	19	`76`
Semantic Cleanup	16	`127`
Attention Notes	14	`151`
Graphify Always On Agents Md	2	`442`
Graphify Always On Antigravity Rules	2	`443`
Other	49	`444, 544, 140, 496, 497, 498, 499, 500, 766, 767, 769, 780, 781, 783, 796, 811, 812, 814, 815, 817, 818, 823, 825, 829, 831, 834, 835, 836, 837, 838, 954, 955, 956, 957, 958, 959, 960, 961, 962, 963, 964, 965, 966, 967, 968, 969, 970`

Core Flow

Semantic Cleanup -> Extraction Pipeline -> Tests & Fixtures -> CLI & Skill Installers -> Other -> Graph Build -> Outputs & Docs

Graph Report Highlights

6188 nodes · 11460 edges · 971 communities (494 shown, 477 thin omitted)
Extraction: 94% EXTRACTED · 6% INFERRED · 0% AMBIGUOUS · INFERRED: 631 edges (avg confidence: 0.75)
Token cost: 0 input · 0 output
1. `Path` - 89 edges
2. `str` - 85 edges
3. `ingest_scip_json()` - 84 edges

2. Extraction Pipeline

Extraction Pipeline groups implementation around graphify, extractpy, type, test, mostly in graphify-8/graphify/extract.py, graphify-8/tests/test_extract.py, example/raw/parser.py. This section covers 268 nodes and 629 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Extraction Pipeline (268 nodes, 629 edges) subgraph extract_pipeline_graphify_8_graphify_extract_py_1b8fcd58["graphify-8/graphify/extract.py"] graphify_extract_read_text_917874ce("_read_text()
graphify-8/graphify/extract.py") graphify_extract_make_id_4df94315("_make_id()
graphify-8/graphify/extract.py") graphify_extract_file_stem_f74f3a90("_file_stem()
graphify-8/graphify/extract.py") graphify_extract_extract_java_6a6f1401("extract_java()
graphify-8/graphify/extract.py") graphify_8_graphify_extract_py_path_94788361("Path
graphify-8/graphify/extract.py") graphify_extract_raise_recursion_limit_e38165a8("_raise_recursion_limit()
graphify-8/graphify/extract.py") graphify_extract_extract_single_file_d054fe37("_extract_single_file()
graphify-8/graphify/extract.py") graphify_extract_safe_extract_49d93a17("_safe_extract()
graphify-8/graphify/extract.py") graphify_extract_extract_sequential_f95ece90("_extract_sequential()
graphify-8/graphify/extract.py") graphify_extract_import_python_29147533("_import_python()
graphify-8/graphify/extract.py") graphify_extract_resolve_c_include_path_d7fdd532("_resolve_c_include_path()
graphify-8/graphify/extract.py") graphify_extract_resolve_js_import_target_01da4c71("_resolve_js_import_target()
graphify-8/graphify/extract.py") graphify_extract_resolve_lua_import_target_0e2425c8("_resolve_lua_import_target()
graphify-8/graphify/extract.py") graphify_extract_apply_symbol_resolution_facts_7ee1d4d8("symbol resolution facts()
graphify-8/graphify/extract.py") graphify_extract_collect_js_symbol_resolution_fa_48a374a4("symbol resolution facts()
graphify-8/graphify/extract.py") graphify_extract_csharp_extra_walk_78a7dc72("_csharp_extra_walk()
graphify-8/graphify/extract.py") graphify_extract_disambiguate_colliding_node_ids_03333d7a("colliding node ids()
graphify-8/graphify/extract.py") end raw_parser_parse_file_cf7252df("parse_file()
example/raw/parser.py") graphify_extract_raise_recursion_limit_e38165a8 -->|calls| graphify_extract_extract_single_file_d054fe37 graphify_extract_safe_extract_49d93a17 -->|calls| graphify_extract_extract_sequential_f95ece90 graphify_extract_safe_extract_49d93a17 -->|calls| graphify_extract_extract_single_file_d054fe37 graphify_8_graphify_extract_py_path_94788361 -->|calls| graphify_extract_extract_single_file_d054fe37 graphify_8_graphify_extract_py_path_94788361 -->|calls| graphify_extract_import_python_29147533 graphify_8_graphify_extract_py_path_94788361 -->|calls| graphify_extract_resolve_c_include_path_d7fdd532 graphify_8_graphify_extract_py_path_94788361 -->|calls| graphify_extract_resolve_js_import_target_01da4c71 graphify_8_graphify_extract_py_path_94788361 -->|calls| graphify_extract_resolve_lua_import_target_0e2425c8 graphify_extract_make_id_4df94315 -->|calls| graphify_extract_apply_symbol_resolution_facts_7ee1d4d8 graphify_extract_make_id_4df94315 -->|calls| graphify_extract_collect_js_symbol_resolution_fa_48a374a4 graphify_extract_make_id_4df94315 -->|calls| graphify_extract_csharp_extra_walk_78a7dc72 graphify_extract_make_id_4df94315 -->|calls| graphify_extract_disambiguate_colliding_node_ids_03333d7a graphify_extract_make_id_4df94315 -->|calls| graphify_extract_import_python_29147533 graphify_extract_make_id_4df94315 -->|calls| graphify_extract_resolve_js_import_target_01da4c71 graphify_extract_make_id_4df94315 -->|calls| graphify_extract_resolve_lua_import_target_0e2425c8 graphify_extract_file_stem_f74f3a90 -->|calls| graphify_extract_collect_js_symbol_resolution_fa_48a374a4 graphify_extract_read_text_917874ce -->|calls| graphify_extract_collect_js_symbol_resolution_fa_48a374a4 graphify_extract_read_text_917874ce -->|calls| graphify_extract_csharp_extra_walk_78a7dc72 graphify_extract_read_text_917874ce -->|calls| graphify_extract_import_python_29147533 %% Omitted for readability: 250 nodes, 0 edges class graphify_extract_read_text_917874ce function; class graphify_extract_make_id_4df94315 function; class graphify_extract_file_stem_f74f3a90 function; class graphify_extract_extract_java_6a6f1401 function; class graphify_8_graphify_extract_py_path_94788361 klass; class graphify_extract_raise_recursion_limit_e38165a8 function; class graphify_extract_extract_single_file_d054fe37 function; class graphify_extract_safe_extract_49d93a17 function; class graphify_extract_extract_sequential_f95ece90 function; class graphify_extract_import_python_29147533 function; class graphify_extract_resolve_c_include_path_d7fdd532 function; class graphify_extract_resolve_js_import_target_01da4c71 function; class graphify_extract_resolve_lua_import_target_0e2425c8 function; class graphify_extract_apply_symbol_resolution_facts_7ee1d4d8 function; class graphify_extract_collect_js_symbol_resolution_fa_48a374a4 function; class graphify_extract_csharp_extra_walk_78a7dc72 function; class graphify_extract_disambiguate_colliding_node_ids_03333d7a function; class raw_parser_parse_file_cf7252df function; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`extract.py` graphify-8/graphify/extract.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in graphify-8/graphify/extract.py.
2	`_make_id()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`_csharp_extra_walk()` graphify-8/graphify/extract.py `_extract_generic()` graphify-8/graphify/extract.py `_extract_pascal_regex()` graphify-8/graphify/extract.py +23 more	_make_id() node in graphify-8/graphify/extract.py.
3	`str` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/graphify/extract.py.
4	`_file_stem()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`_extract_generic()` graphify-8/graphify/extract.py `_extract_pascal_regex()` graphify-8/graphify/extract.py `_extract_python_rationale()` graphify-8/graphify/extract.py +9 more	_file_stem() node in graphify-8/graphify/extract.py.
5	`_source_location()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`_semantic_reference_edge()` graphify-8/graphify/extract.py	_source_location() node in graphify-8/graphify/extract.py.
6	`int` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	int node in graphify-8/graphify/extract.py.
7	`_semantic_reference_edge()` graphify-8/graphify/extract.py	Function	`_source_location()` graphify-8/graphify/extract.py	`context and source()` graphify-8/tests/test_extract.py	_semantic_reference_edge() node in graphify-8/graphify/extract.py.
8	`_resolve_js_module_path()` graphify-8/graphify/extract.py	Function	`_resolve_js_import_path()` graphify-8/graphify/extract.py `_resolve_workspace_import()` graphify-8/graphify/extract.py	`_resolve_js_import_target()` graphify-8/graphify/extract.py `symbol resolution facts()` graphify-8/graphify/extract.py	_resolve_js_module_path() node in graphify-8/graphify/extract.py.
9	`_read_text()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`_c_collect_type_refs()` graphify-8/graphify/extract.py `_cpp_collect_type_refs()` graphify-8/graphify/extract.py `_csharp_attribute_names()` graphify-8/graphify/extract.py +41 more	_read_text() node in graphify-8/graphify/extract.py.
10	`bytes` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	bytes node in graphify-8/graphify/extract.py.
11	`_python_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	`_python_collect_param_refs()` graphify-8/graphify/extract.py	_python_collect_type_refs() node in graphify-8/graphify/extract.py.
12	`bool` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	bool node in graphify-8/graphify/extract.py.
13	`_csharp_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_csharp_collect_type_refs() node in graphify-8/graphify/extract.py.
14	`_java_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_java_collect_type_refs() node in graphify-8/graphify/extract.py.
15	`_go_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_go_collect_type_refs() node in graphify-8/graphify/extract.py.
16	`_rust_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_rust_collect_type_refs() node in graphify-8/graphify/extract.py.
17	`_php_name_text()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	`_php_collect_type_refs()` graphify-8/graphify/extract.py	_php_name_text() node in graphify-8/graphify/extract.py.
18	`_php_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_php_name_text()` graphify-8/graphify/extract.py	No direct outbound edge	_php_collect_type_refs() node in graphify-8/graphify/extract.py.
19	`_kotlin_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_kotlin_collect_type_refs() node in graphify-8/graphify/extract.py.
20	`_swift_classify_base()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	_swift_classify_base() node in graphify-8/graphify/extract.py.
21	`_swift_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_swift_collect_type_refs() node in graphify-8/graphify/extract.py.
22	`_c_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_c_collect_type_refs() node in graphify-8/graphify/extract.py.
23	`_cpp_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_cpp_collect_type_refs() node in graphify-8/graphify/extract.py.
24	`_scala_collect_type_refs()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py	No direct outbound edge	_scala_collect_type_refs() node in graphify-8/graphify/extract.py.
25	`_python_collect_param_refs()` graphify-8/graphify/extract.py	Function	`_python_collect_type_refs()` graphify-8/graphify/extract.py	No direct outbound edge	_python_collect_param_refs() node in graphify-8/graphify/extract.py.
26	`_resolve_js_import_target()` graphify-8/graphify/extract.py	Function	`_make_id()` graphify-8/graphify/extract.py `_resolve_js_module_path()` graphify-8/graphify/extract.py `Path` graphify-8/graphify/extract.py	`_dynamic_import_js()` graphify-8/graphify/extract.py `_import_js()` graphify-8/graphify/extract.py `_require_imports_js()` graphify-8/graphify/extract.py	_resolve_js_import_target() node in graphify-8/graphify/extract.py.
27	`_import_js()` graphify-8/graphify/extract.py	Function	`_file_stem()` graphify-8/graphify/extract.py `_make_id()` graphify-8/graphify/extract.py `_read_text()` graphify-8/graphify/extract.py +1 more	No direct outbound edge	_import_js() node in graphify-8/graphify/extract.py.
28	`_dynamic_import_js()` graphify-8/graphify/extract.py	Function	`_read_text()` graphify-8/graphify/extract.py `_resolve_js_import_target()` graphify-8/graphify/extract.py	No direct outbound edge	_dynamic_import_js() node in graphify-8/graphify/extract.py.
29	`_find_require_call()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`_require_imports_js()` graphify-8/graphify/extract.py	_find_require_call() node in graphify-8/graphify/extract.py.
30	`_require_imports_js()` graphify-8/graphify/extract.py	Function	`_file_stem()` graphify-8/graphify/extract.py `_find_require_call()` graphify-8/graphify/extract.py `_make_id()` graphify-8/graphify/extract.py +2 more	`_js_extra_walk()` graphify-8/graphify/extract.py	_require_imports_js() node in graphify-8/graphify/extract.py.

Key Files

File	Coverage
`graphify-8/graphify/extract.py`	212 nodes
`graphify-8/tests/test_extract.py`	15 nodes
`example/raw/parser.py`	15 nodes
`graphify-8/tests/test_languages.py`	13 nodes
`worked/httpx/review.md`	10 nodes
`graphify-8/graphify/watch.py`	1 nodes
`graphify-8/tests/test_import_extension_resolution.py`	1 nodes
`graphify-8/tests/test_multilang.py`	1 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x218, calls x189, contains x131, explains x90. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

3. Graph Build

Graph Build groups implementation around graphify, worked, github, buildpy, mostly in graphify-8/graphify/build.py, worked/rsl-siege-manager/manifest.json, graphify-8/tests/test_build.py. This section covers 283 nodes and 365 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Graph Build (283 nodes, 365 edges) subgraph build_graph_graphify_8_graphify_build_py_2ddcf5e6["graphify-8/graphify/build.py"] graphify_build_edge_data_ab141f07("edge_data()
graphify-8/graphify/build.py") graphify_build_edge_datas_cff593da("edge_datas()
graphify-8/graphify/build.py") graphify_build_norm_source_file_f6b00417("_norm_source_file()
graphify-8/graphify/build.py") graphify_build_build_merge_0027514d("build_merge()
graphify-8/graphify/build.py") graphify_build_normalize_id_9bd10e4f("_normalize_id()
graphify-8/graphify/build.py") graphify_build_build_from_json_3db2babd("build_from_json()
graphify-8/graphify/build.py") graphify_8_graphify_build_py_path_f53339ea("Path
graphify-8/graphify/build.py") end subgraph build_graph_graphify_8_graphify_affected_py_ca81011b["graphify-8/graphify/affected.py"] graphify_affected_node_label_4fd59c4c("_node_label()
graphify-8/graphify/affected.py") graphify_affected_format_affected_dd14eee9("format_affected()
graphify-8/graphify/affected.py") graphify_affected_format_location_7612c790("_format_location()
graphify-8/graphify/affected.py") graphify_affected_resolve_seed_daee8afc("resolve_seed()
graphify-8/graphify/affected.py") graphify_affected_affected_nodes_dc89c24e("affected_nodes()
graphify-8/graphify/affected.py") end subgraph build_graph_graphify_8_tests_test_build_py_2d31febb["graphify-8/tests/test_build.py"] tests_test_build_test_build_from_json_preserves_4e1e4618("on bidirectional pair()
graphify-8/tests/test_build.py") tests_test_build_test_edge_data_multidigraph_045b653f("edge data multidigraph()
graphify-8/tests/test_build.py") tests_test_build_test_edge_data_multigraph_with_57bb78a4("with parallel edges()
graphify-8/tests/test_build.py") tests_test_build_test_edge_data_node_link_multig_58fc4363("link multigraph roundtrip()
graphify-8/tests/test_build.py") end raw_validator_validate_document_c0018c2a("validate_document()
example/raw/validator.py") graphify_symbol_resolution_bash_make_id_29527631("_bash_make_id()
graphify-8/graphify/symbol_resolution.py") graphify_affected_node_label_4fd59c4c -->|calls| graphify_affected_format_affected_dd14eee9 graphify_affected_format_location_7612c790 -->|calls| graphify_affected_format_affected_dd14eee9 graphify_affected_resolve_seed_daee8afc -->|calls| graphify_affected_format_affected_dd14eee9 graphify_affected_affected_nodes_dc89c24e -->|calls| graphify_affected_format_affected_dd14eee9 graphify_build_normalize_id_9bd10e4f -->|calls| graphify_build_build_from_json_3db2babd graphify_build_norm_source_file_f6b00417 -->|calls| graphify_build_build_from_json_3db2babd graphify_build_norm_source_file_f6b00417 -->|calls| graphify_build_build_merge_0027514d graphify_build_norm_source_file_f6b00417 -->|calls| graphify_8_graphify_build_py_path_f53339ea graphify_build_edge_data_ab141f07 -->|calls| graphify_build_build_from_json_3db2babd graphify_build_edge_data_ab141f07 -->|calls| tests_test_build_test_build_from_json_preserves_4e1e4618 graphify_build_edge_data_ab141f07 -->|calls| tests_test_build_test_edge_data_multidigraph_045b653f graphify_build_edge_data_ab141f07 -->|calls| tests_test_build_test_edge_data_multigraph_with_57bb78a4 graphify_build_edge_data_ab141f07 -->|calls| tests_test_build_test_edge_data_node_link_multig_58fc4363 graphify_build_edge_datas_cff593da -->|calls| tests_test_build_test_edge_data_multidigraph_045b653f graphify_build_edge_datas_cff593da -->|calls| tests_test_build_test_edge_data_node_link_multig_58fc4363 %% Omitted for readability: 265 nodes, 0 edges class graphify_build_edge_data_ab141f07 function; class graphify_build_edge_datas_cff593da function; class graphify_build_norm_source_file_f6b00417 function; class graphify_build_build_merge_0027514d function; class graphify_build_normalize_id_9bd10e4f function; class graphify_build_build_from_json_3db2babd function; class graphify_8_graphify_build_py_path_f53339ea klass; class graphify_affected_node_label_4fd59c4c function; class graphify_affected_format_affected_dd14eee9 function; class graphify_affected_format_location_7612c790 function; class graphify_affected_resolve_seed_daee8afc function; class graphify_affected_affected_nodes_dc89c24e function; class tests_test_build_test_build_from_json_preserves_4e1e4618 test; class tests_test_build_test_edge_data_multidigraph_045b653f test; class tests_test_build_test_edge_data_multigraph_with_57bb78a4 test; class tests_test_build_test_edge_data_node_link_multig_58fc4363 test; class raw_validator_validate_document_c0018c2a function; class graphify_symbol_resolution_bash_make_id_29527631 function; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`Graphify README` README.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Graphify README.
2	`Graphify` README.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
3	`graphifyy PyPI Package` README.md	Function	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
4	`graphify-out Output Directory` README.md	Function	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
5	`GRAPH_REPORT.md` README.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
6	`God Nodes` README.md	Class	External entry / no inbound edge	No direct outbound edge	God Nodes node in README.md.
7	`.graphifyignore` README.md	Function	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
8	`Graphify MCP Server` README.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
9	`Penpax` README.md	Class	External entry / no inbound edge	No direct outbound edge	Penpax node in README.md.
10	`Confidence Labels (EXTRACTED / INFERRED / AMBIGUOUS)` ARCHITECTURE.md	Class	External entry / no inbound edge	No direct outbound edge	Confidence Labels (EXTRACTED / INFERRED / AMBIGUOUS) node in ARCHITECTURE.md.
11	`Graphify Changelog` CHANGELOG.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Graphify Changelog.
12	`AGENTS.md Graph Usage Rules` AGENTS.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing AGENTS.md Graph Usage Rules.
13	`skillgen-check Pre-commit Hook` .pre-commit-config.yaml	UI	External entry / no inbound edge	No direct outbound edge	skillgen-check Pre-commit Hook node in .pre-commit-config.yaml.
14	`tools/skillgen Skill Generator` .pre-commit-config.yaml	Function	External entry / no inbound edge	No direct outbound edge	tools/skillgen Skill Generator node in .pre-commit-config.yaml.
15	`GitHub Funding Config (sponsor: safishamsi)` .github/FUNDING.yml	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing GitHub Funding Config (sponsor: safishamsi).
16	`CI Workflow` .github/workflows/ci.yml	Class	External entry / no inbound edge	No direct outbound edge	CI Workflow node in .github/workflows/ci.yml.
17	`CI skillgen-check Job` .github/workflows/ci.yml	Class	External entry / no inbound edge	No direct outbound edge	CI skillgen-check Job node in .github/workflows/ci.yml.
18	`CI Test Job (pytest matrix 3.10/3.12)` .github/workflows/ci.yml	Class	External entry / no inbound edge	No direct outbound edge	Verifies imports, entry points, or version behavior.
19	`How Graphify Works` docs/how-it-works.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing How Graphify Works.
20	`Three-Pass Extraction` docs/how-it-works.md	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Three-Pass Extraction.
21	`Leiden Community Detection` docs/how-it-works.md	Class	External entry / no inbound edge	No direct outbound edge	Leiden Community Detection node in docs/how-it-works.md.
22	`From Louvain to Leiden (Nature Scientific Reports)` docs/how-it-works.md	Class	External entry / no inbound edge	No direct outbound edge	From Louvain to Leiden (Nature Scientific Reports) node in docs/how-it-works.md.
23	`Confidence Tagging Rubric` docs/how-it-works.md	Class	External entry / no inbound edge	No direct outbound edge	Confidence Tagging Rubric node in docs/how-it-works.md.
24	`Token Benchmark` docs/how-it-works.md	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Token Benchmark.
25	`Parallel Extraction` docs/how-it-works.md	Class	External entry / no inbound edge	No direct outbound edge	Parallel Extraction node in docs/how-it-works.md.
26	`SHA256 Content Cache` docs/how-it-works.md	Class	External entry / no inbound edge	No direct outbound edge	Caches analysis results or computes cache keys.
27	`graph.json Node-Link Format` docs/how-it-works.md	Function	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
28	`Docker MCP Toolkit + SQLite MCP Server Runbook` docs/docker-mcp-sqlite.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Docker MCP Toolkit + SQLite MCP Server Runbook.
29	`Docker MCP Toolkit` docs/docker-mcp-sqlite.md	Class	External entry / no inbound edge	No direct outbound edge	Docker MCP Toolkit node in docs/docker-mcp-sqlite.md.
30	`SQLite MCP Server (mcp/sqlite)` docs/docker-mcp-sqlite.md	Class	External entry / no inbound edge	No direct outbound edge	SQLite MCP Server (mcp/sqlite) node in docs/docker-mcp-sqlite.md.

Key Files

File	Coverage
`graphify-8/graphify/build.py`	26 nodes
`worked/rsl-siege-manager/manifest.json`	23 nodes
`graphify-8/tests/test_build.py`	22 nodes
`httpx/raw/utils.py`	21 nodes
`graphify-8/graphify/symbol_resolution.py`	13 nodes
`example/raw/validator.py`	13 nodes
`graphify-8/graphify/affected.py`	12 nodes
`README.md`	9 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x186, contains x81, explains x41, calls x37. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

4. Analysis & Clustering

Analysis & Clustering groups implementation around graphify, references, worked, analyzepy, mostly in graphify-8/graphify/detect.py, graphify-8/graphify/analyze.py, mixed-corpus/raw/analyze.py. This section covers 284 nodes and 533 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Analysis & Clustering (284 nodes, 533 edges) subgraph analysis_clustering_graphify_8_graphify_analyze_6f68afbb["graphify-8/graphify/analyze.py"] graphify_analyze_is_file_node_d739de9d("_is_file_node()
graphify-8/graphify/analyze.py") graphify_analyze_cross_language_ea2c8b42("_cross_language()
graphify-8/graphify/analyze.py") graphify_analyze_surprise_score_5cf4f213("_surprise_score()
graphify-8/graphify/analyze.py") graphify_analyze_node_community_map_554f4f7e("_node_community_map()
graphify-8/graphify/analyze.py") graphify_analyze_cross_community_surprises_f89caae2("_cross_community_surprises()
graphify-8/graphify/analyze.py") graphify_analyze_cross_file_surprises_a5693290("_cross_file_surprises()
graphify-8/graphify/analyze.py") graphify_analyze_suggest_questions_d02dc0b1("suggest_questions()
graphify-8/graphify/analyze.py") graphify_analyze_god_nodes_ea4f5514("god_nodes()
graphify-8/graphify/analyze.py") graphify_analyze_is_json_key_node_4da224cf("_is_json_key_node()
graphify-8/graphify/analyze.py") graphify_analyze_is_concept_node_bb4a3235("_is_concept_node()
graphify-8/graphify/analyze.py") graphify_analyze_surprising_connections_06a72597("surprising_connections()
graphify-8/graphify/analyze.py") graphify_analyze_file_category_a731d246("_file_category()
graphify-8/graphify/analyze.py") graphify_analyze_top_level_dir_cde4b86d("_top_level_dir()
graphify-8/graphify/analyze.py") end subgraph analysis_clustering_graphify_8_graphify_benchmar_cff29591["graphify-8/graphify/benchmark.py"] graphify_benchmark_run_benchmark_1a16727a("run_benchmark()
graphify-8/graphify/benchmark.py") graphify_benchmark_query_subgraph_tokens_78979dbd("_query_subgraph_tokens()
graphify-8/graphify/benchmark.py") graphify_benchmark_safe_8ab95559("_safe()
graphify-8/graphify/benchmark.py") end subgraph analysis_clustering_graphify_8_tests_test_benchm_05b010d6["graphify-8/tests/test_benchmark.py"] tests_test_benchmark_make_graph_e35ae0e8("_make_graph()
graphify-8/tests/test_benchmark.py") tests_test_benchmark_write_graph_a41eb9f7("_write_graph()
graphify-8/tests/test_benchmark.py") end graphify_analyze_cross_language_ea2c8b42 -->|calls| graphify_analyze_surprise_score_5cf4f213 graphify_analyze_node_community_map_554f4f7e -->|calls| graphify_analyze_cross_community_surprises_f89caae2 graphify_analyze_node_community_map_554f4f7e -->|calls| graphify_analyze_cross_file_surprises_a5693290 graphify_analyze_node_community_map_554f4f7e -->|calls| graphify_analyze_suggest_questions_d02dc0b1 graphify_analyze_is_file_node_d739de9d -->|calls| graphify_analyze_cross_community_surprises_f89caae2 graphify_analyze_is_file_node_d739de9d -->|calls| graphify_analyze_cross_file_surprises_a5693290 graphify_analyze_is_file_node_d739de9d -->|calls| graphify_analyze_god_nodes_ea4f5514 graphify_analyze_is_file_node_d739de9d -->|calls| graphify_analyze_suggest_questions_d02dc0b1 graphify_analyze_is_json_key_node_4da224cf -->|calls| graphify_analyze_god_nodes_ea4f5514 graphify_analyze_god_nodes_ea4f5514 -->|calls| graphify_analyze_is_concept_node_bb4a3235 graphify_analyze_surprising_connections_06a72597 -->|calls| graphify_analyze_cross_community_surprises_f89caae2 graphify_analyze_surprising_connections_06a72597 -->|calls| graphify_analyze_cross_file_surprises_a5693290 graphify_analyze_is_concept_node_bb4a3235 -->|calls| graphify_analyze_cross_file_surprises_a5693290 graphify_analyze_is_concept_node_bb4a3235 -->|calls| graphify_analyze_suggest_questions_d02dc0b1 graphify_analyze_file_category_a731d246 -->|calls| graphify_analyze_surprise_score_5cf4f213 graphify_analyze_top_level_dir_cde4b86d -->|calls| graphify_analyze_surprise_score_5cf4f213 graphify_analyze_surprise_score_5cf4f213 -->|calls| graphify_analyze_cross_file_surprises_a5693290 graphify_analyze_cross_file_surprises_a5693290 -->|calls| graphify_analyze_cross_community_surprises_f89caae2 graphify_benchmark_query_subgraph_tokens_78979dbd -->|calls| graphify_benchmark_run_benchmark_1a16727a %% Omitted for readability: 266 nodes, 0 edges class graphify_analyze_is_file_node_d739de9d function; class graphify_analyze_cross_language_ea2c8b42 function; class graphify_analyze_surprise_score_5cf4f213 function; class graphify_analyze_node_community_map_554f4f7e function; class graphify_analyze_cross_community_surprises_f89caae2 function; class graphify_analyze_cross_file_surprises_a5693290 function; class graphify_analyze_suggest_questions_d02dc0b1 function; class graphify_analyze_god_nodes_ea4f5514 function; class graphify_analyze_is_json_key_node_4da224cf function; class graphify_analyze_is_concept_node_bb4a3235 function; class graphify_analyze_surprising_connections_06a72597 function; class graphify_analyze_file_category_a731d246 function; class graphify_analyze_top_level_dir_cde4b86d function; class graphify_benchmark_run_benchmark_1a16727a function; class graphify_benchmark_query_subgraph_tokens_78979dbd function; class graphify_benchmark_safe_8ab95559 function; class tests_test_benchmark_make_graph_e35ae0e8 test; class tests_test_benchmark_write_graph_a41eb9f7 test; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`Kilo Platform Rules` fragments/extra/kilo-rules.md	Class	External entry / no inbound edge	No direct outbound edge	Kilo Platform Rules node in fragments/extra/kilo-rules.md.
2	`Native Task Tool Extraction Fan-out` fragments/extra/kilo-rules.md	Class	External entry / no inbound edge	No direct outbound edge	Native Task Tool Extraction Fan-out node in fragments/extra/kilo-rules.md.
3	`PowerShell 5.1 ANSI Scrolling Troubleshooting` fragments/extra/powershell-troubleshooting.md	Class	External entry / no inbound edge	No direct outbound edge	PowerShell 5.1 ANSI Scrolling Troubleshooting node in fragments/extra/powershell-troubleshooting.md.
4	`graspologic Library` fragments/extra/powershell-troubleshooting.md	Function	External entry / no inbound edge	No direct outbound edge	graspologic Library node in fragments/extra/powershell-troubleshooting.md.
5	`NetworkX Built-in Louvain Fallback` fragments/extra/powershell-troubleshooting.md	Class	External entry / no inbound edge	No direct outbound edge	NetworkX Built-in Louvain Fallback node in fragments/extra/powershell-troubleshooting.md.
6	`Query Stub (CLI with Inline NetworkX Fallback)` fragments/query-stub/cli-inline.md	Entry	External entry / no inbound edge	No direct outbound edge	Query Stub (CLI with Inline NetworkX Fallback) node in fragments/query-stub/cli-inline.md.
7	`Query Stub (CLI-only with Vocab Expansion)` fragments/query-stub/cli.md	Entry	External entry / no inbound edge	No direct outbound edge	Query Stub (CLI-only with Vocab Expansion) node in fragments/query-stub/cli.md.
8	`Post-commit Hook (AGENTS.md Host Variant)` references/host/hooks-agents-md.md	UI	External entry / no inbound edge	No direct outbound edge	Post-commit Hook (AGENTS.md Host Variant) node in references/host/hooks-agents-md.md.
9	`Native AGENTS.md Integration` references/host/hooks-agents-md.md	Class	External entry / no inbound edge	No direct outbound edge	Native AGENTS.md Integration node in references/host/hooks-agents-md.md.
10	`Host Template Placeholders (@@HOST_DISPLAY@@ etc.)` references/host/hooks-agents-md.md	Class	External entry / no inbound edge	No direct outbound edge	Host Template Placeholders (@@HOST_DISPLAY@@ etc.) node in references/host/hooks-agents-md.md.
11	`BFS/DFS Traversal Modes` references/query/cli-inline.md	Class	External entry / no inbound edge	No direct outbound edge	BFS/DFS Traversal Modes node in references/query/cli-inline.md.
12	`Inline NetworkX Traversal Fallback` references/query/cli-inline.md	Class	External entry / no inbound edge	No direct outbound edge	Inline NetworkX Traversal Fallback node in references/query/cli-inline.md.
13	`Token-Budget-Aware Query Output` references/query/cli-inline.md	Class	External entry / no inbound edge	No direct outbound edge	Token-Budget-Aware Query Output node in references/query/cli-inline.md.
14	`save-result Feedback Loop` references/query/cli-inline.md	Function	External entry / no inbound edge	No direct outbound edge	save-result Feedback Loop node in references/query/cli-inline.md.
15	`/graphify path Flow` references/query/cli-inline.md	Function	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
16	`/graphify explain Flow` references/query/cli-inline.md	Function	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
17	`Constrained Query Vocabulary Expansion (Step 0)` references/query/cli.md	Class	External entry / no inbound edge	No direct outbound edge	Constrained Query Vocabulary Expansion (Step 0) node in references/query/cli.md.
18	`graphify query CLI Traversal` references/query/cli.md	Entry	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
19	`/graphify add URL Ingestion` references/shared/add-watch.md	Function	External entry / no inbound edge	No direct outbound edge	Turns a local path or remote repository into analysis context.
20	`--watch Folder Watcher` references/shared/add-watch.md	Function	External entry / no inbound edge	No direct outbound edge	--watch Folder Watcher node in references/shared/add-watch.md.
21	`Export Flags (--wiki/--neo4j/--svg/--graphml/--mcp)` references/shared/exports.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
22	`Graphify MCP Server` references/shared/exports.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
23	`Token Reduction Benchmark Step` references/shared/exports.md	Class	External entry / no inbound edge	No direct outbound edge	Token Reduction Benchmark Step node in references/shared/exports.md.
24	`graphify clone (GitHub Repos)` references/shared/github-and-merge.md	Function	External entry / no inbound edge	No direct outbound edge	Turns a local path or remote repository into analysis context.
25	`Cross-Repo / Monorepo graphify merge-graphs` references/shared/github-and-merge.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
26	`Post-commit Hook (graphify hook install)` references/shared/hooks.md	UI	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
27	`Native CLAUDE.md Integration (graphify claude install)` references/shared/hooks.md	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
28	`Whisper Video/Audio Transcription (Step 2.5)` references/shared/transcribe.md	Class	External entry / no inbound edge	No direct outbound edge	Whisper Video/Audio Transcription (Step 2.5) node in references/shared/transcribe.md.
29	`God-Node Domain Hint Whisper Prompt` references/shared/transcribe.md	Class	External entry / no inbound edge	No direct outbound edge	Builds structured prompts for model calls.
30	`--update Incremental Re-extraction` references/shared/update.md	Function	External entry / no inbound edge	No direct outbound edge	--update Incremental Re-extraction node in references/shared/update.md.

Key Files

File	Coverage
`graphify-8/graphify/detect.py`	35 nodes
`graphify-8/graphify/analyze.py`	31 nodes
`mixed-corpus/raw/analyze.py`	29 nodes
`graphify-8/tests/test_benchmark.py`	23 nodes
`graphify-8/graphify/cluster.py`	19 nodes
`graphify-8/graphify/benchmark.py`	16 nodes
`mixed-corpus/raw/cluster.py`	15 nodes
`worked/karpathy-repos/README.md`	9 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x243, calls x106, contains x80, explains x61. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

5. Outputs & Docs

Outputs & Docs groups implementation around graphify, htmlpy, callflow, test, mostly in graphify-8/graphify/callflow_html.py, graphify-8/graphify/export.py, graphify-8/graphify/wiki.py. This section covers 279 nodes and 602 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Outputs & Docs (279 nodes, 602 edges) subgraph outputs_docs_graphify_8_graphify_callflow_html_p_fe2d3751["graphify-8/graphify/callflow_html.py"] graphify_callflow_html_pick_text_53929185("pick_text()
graphify-8/graphify/callflow_html.py") graphify_8_graphify_callflow_html_py_counter_b2411448("Counter
graphify-8/graphify/callflow_html.py") graphify_callflow_html_safe_file_path_79fa516b("safe_file_path()
graphify-8/graphify/callflow_html.py") graphify_8_graphify_callflow_html_py_path_a2c142c5("Path
graphify-8/graphify/callflow_html.py") graphify_callflow_html_read_json_4a1099f2("read_json()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_load_graph_67eac764("load_graph()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_load_labels_ef9472ed("load_labels()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_load_sections_358fce12("load_sections()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_humanize_label_9d65c0a5("humanize_label()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_infer_project_name_4bef913f("infer_project_name()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_node_label_16dd0c99("node_label()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_normalize_node_ee6a0d91("normalize_node()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_resolve_graphify_paths_b38ce019("resolve_graphify_paths()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_first_present_09cf3a18("first_present()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_endpoint_id_c11512e7("endpoint_id()
graphify-8/graphify/callflow_html.py") graphify_callflow_html_normalize_edge_3d74a18e("normalize_edge()
graphify-8/graphify/callflow_html.py") end graphify_report_generate_fbbe8daa("generate()
graphify-8/graphify/report.py") tests_test_report_make_inputs_d8e24892("make_inputs()
graphify-8/tests/test_report.py") graphify_callflow_html_read_json_4a1099f2 -->|calls| graphify_callflow_html_load_graph_67eac764 graphify_callflow_html_read_json_4a1099f2 -->|calls| graphify_callflow_html_load_labels_ef9472ed graphify_callflow_html_read_json_4a1099f2 -->|calls| graphify_callflow_html_load_sections_358fce12 graphify_8_graphify_callflow_html_py_path_a2c142c5 -->|calls| graphify_callflow_html_humanize_label_9d65c0a5 graphify_8_graphify_callflow_html_py_path_a2c142c5 -->|calls| graphify_callflow_html_infer_project_name_4bef913f graphify_8_graphify_callflow_html_py_path_a2c142c5 -->|calls| graphify_callflow_html_node_label_16dd0c99 graphify_8_graphify_callflow_html_py_path_a2c142c5 -->|calls| graphify_callflow_html_normalize_node_ee6a0d91 graphify_8_graphify_callflow_html_py_path_a2c142c5 -->|calls| graphify_callflow_html_resolve_graphify_paths_b38ce019 graphify_callflow_html_first_present_09cf3a18 -->|calls| graphify_callflow_html_endpoint_id_c11512e7 graphify_callflow_html_first_present_09cf3a18 -->|calls| graphify_callflow_html_load_labels_ef9472ed graphify_callflow_html_first_present_09cf3a18 -->|calls| graphify_callflow_html_normalize_edge_3d74a18e graphify_callflow_html_first_present_09cf3a18 -->|calls| graphify_callflow_html_normalize_node_ee6a0d91 graphify_callflow_html_endpoint_id_c11512e7 -->|calls| graphify_callflow_html_normalize_edge_3d74a18e graphify_callflow_html_normalize_node_ee6a0d91 -->|calls| graphify_callflow_html_load_graph_67eac764 graphify_callflow_html_normalize_edge_3d74a18e -->|calls| graphify_callflow_html_load_graph_67eac764 graphify_callflow_html_safe_file_path_79fa516b -->|calls| graphify_callflow_html_node_label_16dd0c99 graphify_callflow_html_humanize_label_9d65c0a5 -->|calls| graphify_callflow_html_node_label_16dd0c99 %% Omitted for readability: 261 nodes, 0 edges class graphify_callflow_html_pick_text_53929185 function; class graphify_8_graphify_callflow_html_py_counter_b2411448 klass; class graphify_callflow_html_safe_file_path_79fa516b function; class graphify_8_graphify_callflow_html_py_path_a2c142c5 klass; class graphify_callflow_html_read_json_4a1099f2 function; class graphify_callflow_html_load_graph_67eac764 function; class graphify_callflow_html_load_labels_ef9472ed function; class graphify_callflow_html_load_sections_358fce12 function; class graphify_callflow_html_humanize_label_9d65c0a5 function; class graphify_callflow_html_infer_project_name_4bef913f function; class graphify_callflow_html_node_label_16dd0c99 function; class graphify_callflow_html_normalize_node_ee6a0d91 function; class graphify_callflow_html_resolve_graphify_paths_b38ce019 function; class graphify_callflow_html_first_present_09cf3a18 function; class graphify_callflow_html_endpoint_id_c11512e7 api; class graphify_callflow_html_normalize_edge_3d74a18e function; class graphify_report_generate_fbbe8daa function; class tests_test_report_make_inputs_d8e24892 test; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`export.py` graphify-8/graphify/export.py	Module	External entry / no inbound edge	`test_obsidian_filename_cap.py` graphify-8/tests/test_obsidian_filename_cap.py	Module file in graphify-8/graphify/export.py.
2	`Path` graphify-8/graphify/export.py	Class	External entry / no inbound edge	`to_canvas()` graphify-8/graphify/export.py `to_html()` graphify-8/graphify/export.py `to_json()` graphify-8/graphify/export.py +1 more	Path node in graphify-8/graphify/export.py.
3	`str` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/graphify/export.py.
4	`_strip_diacritics()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_json()` graphify-8/graphify/export.py	_strip_diacritics() node in graphify-8/graphify/export.py.
5	`_viz_node_limit()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_html()` graphify-8/graphify/export.py	_viz_node_limit() node in graphify-8/graphify/export.py.
6	`int` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	int node in graphify-8/graphify/export.py.
7	`_html_styles()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_html()` graphify-8/graphify/export.py	Exports documentation data to a target format.
8	`_hyperedge_script()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_html()` graphify-8/graphify/export.py	_hyperedge_script() node in graphify-8/graphify/export.py.
9	`_html_script()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_html()` graphify-8/graphify/export.py	Exports documentation data to a target format.
10	`Graph` graphify-8/graphify/export.py	Class	External entry / no inbound edge	No direct outbound edge	Builds dependency relationships and graph data.
11	`_git_head()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_json()` graphify-8/graphify/export.py	Turns a local path or remote repository into analysis context.
12	`to_json()` graphify-8/graphify/export.py	Function	`_git_head()` graphify-8/graphify/export.py `_strip_diacritics()` graphify-8/graphify/export.py `Path` graphify-8/graphify/export.py	No direct outbound edge	to_json() node in graphify-8/graphify/export.py.
13	`bool` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	bool node in graphify-8/graphify/export.py.
14	`prune_dangling_edges()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	prune_dangling_edges() node in graphify-8/graphify/export.py.
15	`_cypher_escape()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_cypher()` graphify-8/graphify/export.py	_cypher_escape() node in graphify-8/graphify/export.py.
16	`_cypher_label()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	`to_cypher()` graphify-8/graphify/export.py	_cypher_label() node in graphify-8/graphify/export.py.
17	`to_cypher()` graphify-8/graphify/export.py	Function	`_cypher_escape()` graphify-8/graphify/export.py `_cypher_label()` graphify-8/graphify/export.py	No direct outbound edge	to_cypher() node in graphify-8/graphify/export.py.
18	`to_html()` graphify-8/graphify/export.py	Function	`_html_script()` graphify-8/graphify/export.py `_html_styles()` graphify-8/graphify/export.py `_hyperedge_script()` graphify-8/graphify/export.py +2 more	No direct outbound edge	Exports documentation data to a target format.
19	`_cap_filename()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	_cap_filename() node in graphify-8/graphify/export.py.
20	`to_canvas()` graphify-8/graphify/export.py	Function	`Path` graphify-8/graphify/export.py	`file ref capped()` graphify-8/tests/test_obsidian_filename_cap.py	to_canvas() node in graphify-8/graphify/export.py.
21	`push_to_neo4j()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	push_to_neo4j() node in graphify-8/graphify/export.py.
22	`to_svg()` graphify-8/graphify/export.py	Function	External entry / no inbound edge	No direct outbound edge	to_svg() node in graphify-8/graphify/export.py.
23	`Return the effective viz node limit, honoring GRAPHIFY_VIZ_NODE_LIMIT env var.` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return the effective viz node limit, honoring GRAPHIFY_VIZ_NODE_LIMIT env var..
24	`Return the current git HEAD commit hash, or None if not in a git repo.` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return the current git HEAD commit hash, or None if not in a git repo..
25	`Remove edges whose source or target node is not in the node set. Returns th` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Remove edges whose source or target node is not in the node set. Returns th.
26	`Escape a string for safe embedding in a Cypher single-quoted literal. Handl` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Escape a string for safe embedding in a Cypher single-quoted literal. Handl.
27	`Sanitise a value used in identifier position (node label / rel type). Cyphe` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Sanitise a value used in identifier position (node label / rel type). Cyphe.
28	`Generate an interactive vis.js HTML visualization of the graph. Features: n` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Generate an interactive vis.js HTML visualization of the graph. Features: n.
29	Cap a filename stem to ``limit`` UTF-8 bytes so it stays under the 255-byte graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Cap a filename stem to ``limit`` UTF-8 bytes so it stays under the 255-byte.
30	`Export graph as an Obsidian Canvas file - communities as groups, nodes as cards.` graphify-8/graphify/export.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Export graph as an Obsidian Canvas file - communities as groups, nodes as cards..

Key Files

File	Coverage
`graphify-8/graphify/callflow_html.py`	143 nodes
`graphify-8/graphify/export.py`	39 nodes
`graphify-8/graphify/wiki.py`	13 nodes
`graphify-8/graphify/tree_html.py`	12 nodes
`graphify-8/tests/test_obsidian_filename_cap.py`	11 nodes
`graphify-8/tests/test_report.py`	10 nodes
`graphify-8/tests/test_callflow_html.py`	9 nodes
`graphify-8/graphify/report.py`	8 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x209, calls x175, contains x122, explains x87. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

6. CLI & Skill Installers

CLI & Skill Installers groups implementation around graphify, skill, skillgen, expected, mostly in graphify-8/graphify/__main__.py, graphify-8/tests/test_install.py, graphify-8/graphify/llm.py. This section covers 418 nodes and 704 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: CLI & Skill Installers (418 nodes, 704 edges) subgraph cli_skills_graphify_8_graphify_main_py_0653132c["graphify-8/graphify/__main__.py"] graphify_main_claude_install_999eea32("claude_install()
graphify-8/graphify/__main__.py") graphify_main_always_on_c4d9f108("_always_on()
graphify-8/graphify/__main__.py") graphify_main_remove_skill_file_f23a772b("_remove_skill_file()
graphify-8/graphify/__main__.py") graphify_main_platform_skill_destination_d09ad51b("platform skill destination()
graphify-8/graphify/__main__.py") graphify_main_agents_install_797faec7("_agents_install()
graphify-8/graphify/__main__.py") graphify_8_graphify_main_py_path_26f291b9("Path
graphify-8/graphify/__main__.py") graphify_main_antigravity_finalize_fabe54f9("_antigravity_finalize()
graphify-8/graphify/__main__.py") graphify_main_gemini_install_28d227c6("gemini_install()
graphify-8/graphify/__main__.py") graphify_main_getattr_611f923c("__getattr__()
graphify-8/graphify/__main__.py") graphify_main_kiro_install_325f7374("_kiro_install()
graphify-8/graphify/__main__.py") graphify_main_vscode_install_febf7e23("vscode_install()
graphify-8/graphify/__main__.py") graphify_main_default_graph_path_e3d3270f("_default_graph_path()
graphify-8/graphify/__main__.py") graphify_main_main_4f64780e("main()
graphify-8/graphify/__main__.py") graphify_main_resolve_graphify_exe_2f87cac6("_resolve_graphify_exe()
graphify-8/graphify/__main__.py") graphify_main_check_skill_version_ebf23397("_check_skill_version()
graphify-8/graphify/__main__.py") graphify_main_refresh_all_version_stamps_e4ca57a7("all version stamps()
graphify-8/graphify/__main__.py") end subgraph cli_skills_graphify_8_graphify_llm_py_1bac4c3d["graphify-8/graphify/llm.py"] graphify_llm_extraction_system_437d0121("_extraction_system()
graphify-8/graphify/llm.py") graphify_llm_parse_llm_json_8905f4d9("_parse_llm_json()
graphify-8/graphify/llm.py") end graphify_main_always_on_c4d9f108 -->|calls| graphify_main_agents_install_797faec7 graphify_main_always_on_c4d9f108 -->|calls| graphify_8_graphify_main_py_path_26f291b9 graphify_main_always_on_c4d9f108 -->|calls| graphify_main_antigravity_finalize_fabe54f9 graphify_main_always_on_c4d9f108 -->|calls| graphify_main_claude_install_999eea32 graphify_main_always_on_c4d9f108 -->|calls| graphify_main_gemini_install_28d227c6 graphify_main_always_on_c4d9f108 -->|calls| graphify_main_getattr_611f923c graphify_main_always_on_c4d9f108 -->|calls| graphify_main_kiro_install_325f7374 graphify_main_always_on_c4d9f108 -->|calls| graphify_main_vscode_install_febf7e23 graphify_main_default_graph_path_e3d3270f -->|calls| graphify_8_graphify_main_py_path_26f291b9 graphify_main_default_graph_path_e3d3270f -->|calls| graphify_main_main_4f64780e graphify_8_graphify_main_py_path_26f291b9 -->|calls| graphify_main_main_4f64780e graphify_8_graphify_main_py_path_26f291b9 -->|calls| graphify_main_resolve_graphify_exe_2f87cac6 graphify_main_check_skill_version_ebf23397 -->|calls| graphify_main_main_4f64780e graphify_main_refresh_all_version_stamps_e4ca57a7 -->|calls| graphify_main_platform_skill_destination_d09ad51b graphify_main_platform_skill_destination_d09ad51b -->|calls| graphify_main_main_4f64780e graphify_main_platform_skill_destination_d09ad51b -->|calls| graphify_main_remove_skill_file_f23a772b graphify_main_remove_skill_file_f23a772b -->|calls| graphify_main_main_4f64780e graphify_main_gemini_install_28d227c6 -->|calls| graphify_main_main_4f64780e graphify_main_vscode_install_febf7e23 -->|calls| graphify_main_main_4f64780e graphify_main_kiro_install_325f7374 -->|calls| graphify_main_main_4f64780e graphify_main_agents_install_797faec7 -->|calls| graphify_main_main_4f64780e graphify_main_claude_install_999eea32 -->|calls| graphify_main_main_4f64780e %% Omitted for readability: 400 nodes, 0 edges class graphify_main_claude_install_999eea32 function; class graphify_main_always_on_c4d9f108 function; class graphify_main_remove_skill_file_f23a772b function; class graphify_main_platform_skill_destination_d09ad51b function; class graphify_main_agents_install_797faec7 function; class graphify_8_graphify_main_py_path_26f291b9 klass; class graphify_main_antigravity_finalize_fabe54f9 function; class graphify_main_gemini_install_28d227c6 function; class graphify_main_getattr_611f923c function; class graphify_main_kiro_install_325f7374 function; class graphify_main_vscode_install_febf7e23 function; class graphify_main_default_graph_path_e3d3270f function; class graphify_main_main_4f64780e function; class graphify_main_resolve_graphify_exe_2f87cac6 function; class graphify_main_check_skill_version_ebf23397 function; class graphify_main_refresh_all_version_stamps_e4ca57a7 function; class graphify_llm_extraction_system_437d0121 function; class graphify_llm_parse_llm_json_8905f4d9 function; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`__main__.py` graphify-8/graphify/__main__.py	Module	External entry / no inbound edge	`test_claude_md.py` graphify-8/tests/test_claude_md.py	Module file in graphify-8/graphify/__main__.py.
2	`_always_on()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`__getattr__()` graphify-8/graphify/__main__.py `_agents_install()` graphify-8/graphify/__main__.py `_antigravity_finalize()` graphify-8/graphify/__main__.py +5 more	_always_on() node in graphify-8/graphify/__main__.py.
3	`str` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/graphify/__main__.py.
4	`__getattr__()` graphify-8/graphify/__main__.py	Function	`_always_on()` graphify-8/graphify/__main__.py	No direct outbound edge	__getattr__() node in graphify-8/graphify/__main__.py.
5	`_default_graph_path()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`main()` graphify-8/graphify/__main__.py `Path` graphify-8/graphify/__main__.py	Builds dependency relationships and graph data.
6	`_refresh_all_version_stamps()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`install()` graphify-8/graphify/__main__.py `platform skill destination()` graphify-8/graphify/__main__.py	_refresh_all_version_stamps() node in graphify-8/graphify/__main__.py.
7	`_packaged_skill_refs_dir()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`_copy_skill_file()` graphify-8/graphify/__main__.py	_packaged_skill_refs_dir() node in graphify-8/graphify/__main__.py.
8	`_install_skill_references()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`_copy_skill_file()` graphify-8/graphify/__main__.py `vscode_install()` graphify-8/graphify/__main__.py	_install_skill_references() node in graphify-8/graphify/__main__.py.
9	`_copy_skill_file()` graphify-8/graphify/__main__.py	Function	`_install_skill_references()` graphify-8/graphify/__main__.py `_packaged_skill_refs_dir()` graphify-8/graphify/__main__.py `platform skill destination()` graphify-8/graphify/__main__.py	`_amp_install()` graphify-8/graphify/__main__.py `_kiro_install()` graphify-8/graphify/__main__.py `_project_install()` graphify-8/graphify/__main__.py +2 more	_copy_skill_file() node in graphify-8/graphify/__main__.py.
10	`_project_scope_root()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`_project_install()` graphify-8/graphify/__main__.py `gemini_install()` graphify-8/graphify/__main__.py `install()` graphify-8/graphify/__main__.py	_project_scope_root() node in graphify-8/graphify/__main__.py.
11	`_print_project_git_add_hint()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`_project_install()` graphify-8/graphify/__main__.py `gemini_install()` graphify-8/graphify/__main__.py `install()` graphify-8/graphify/__main__.py	Turns a local path or remote repository into analysis context.
12	`_skill_registration()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`install()` graphify-8/graphify/__main__.py	_skill_registration() node in graphify-8/graphify/__main__.py.
13	`_replace_or_append_section()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`_agents_install()` graphify-8/graphify/__main__.py `claude_install()` graphify-8/graphify/__main__.py `gemini_install()` graphify-8/graphify/__main__.py +1 more	_replace_or_append_section() node in graphify-8/graphify/__main__.py.
14	`_print_banner()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`install()` graphify-8/graphify/__main__.py	_print_banner() node in graphify-8/graphify/__main__.py.
15	`install()` graphify-8/graphify/__main__.py	Function	`_copy_skill_file()` graphify-8/graphify/__main__.py `_print_banner()` graphify-8/graphify/__main__.py `_project_scope_root()` graphify-8/graphify/__main__.py +3 more	`_antigravity_install()` graphify-8/graphify/__main__.py `_cursor_install()` graphify-8/graphify/__main__.py `_install_opencode_plugin()` graphify-8/graphify/__main__.py +4 more	install() node in graphify-8/graphify/__main__.py.
16	`gemini_install()` graphify-8/graphify/__main__.py	Function	`_always_on()` graphify-8/graphify/__main__.py `_copy_skill_file()` graphify-8/graphify/__main__.py `_project_scope_root()` graphify-8/graphify/__main__.py +3 more	`_install_gemini_hook()` graphify-8/graphify/__main__.py `_project_install()` graphify-8/graphify/__main__.py `existing gemini md()` graphify-8/tests/test_install.py +6 more	gemini_install() node in graphify-8/graphify/__main__.py.
17	`_install_gemini_hook()` graphify-8/graphify/__main__.py	UI	`gemini_install()` graphify-8/graphify/__main__.py	No direct outbound edge	_install_gemini_hook() node in graphify-8/graphify/__main__.py.
18	`vscode_install()` graphify-8/graphify/__main__.py	Function	`_always_on()` graphify-8/graphify/__main__.py `_install_skill_references()` graphify-8/graphify/__main__.py `_replace_or_append_section()` graphify-8/graphify/__main__.py	`main()` graphify-8/graphify/__main__.py	vscode_install() node in graphify-8/graphify/__main__.py.
19	`_kiro_install()` graphify-8/graphify/__main__.py	Function	`_always_on()` graphify-8/graphify/__main__.py `_copy_skill_file()` graphify-8/graphify/__main__.py	`_project_install()` graphify-8/graphify/__main__.py `main()` graphify-8/graphify/__main__.py	_kiro_install() node in graphify-8/graphify/__main__.py.
20	`_antigravity_finalize()` graphify-8/graphify/__main__.py	Function	`_always_on()` graphify-8/graphify/__main__.py	`_antigravity_install()` graphify-8/graphify/__main__.py `_project_install()` graphify-8/graphify/__main__.py	_antigravity_finalize() node in graphify-8/graphify/__main__.py.
21	`_cursor_install()` graphify-8/graphify/__main__.py	Function	`install()` graphify-8/graphify/__main__.py	`_project_install()` graphify-8/graphify/__main__.py `cursor install idempotent()` graphify-8/tests/test_install.py `install writes rule()` graphify-8/tests/test_install.py +1 more	_cursor_install() node in graphify-8/graphify/__main__.py.
22	`_install_opencode_plugin()` graphify-8/graphify/__main__.py	Function	`install()` graphify-8/graphify/__main__.py	`_agents_install()` graphify-8/graphify/__main__.py	_install_opencode_plugin() node in graphify-8/graphify/__main__.py.
23	`_resolve_graphify_exe()` graphify-8/graphify/__main__.py	Function	`Path` graphify-8/graphify/__main__.py	`_install_codex_hook()` graphify-8/graphify/__main__.py	Builds dependency relationships and graph data.
24	`_install_codex_hook()` graphify-8/graphify/__main__.py	UI	`_resolve_graphify_exe()` graphify-8/graphify/__main__.py	`_agents_install()` graphify-8/graphify/__main__.py	_install_codex_hook() node in graphify-8/graphify/__main__.py.
25	`_agents_install()` graphify-8/graphify/__main__.py	Function	`_always_on()` graphify-8/graphify/__main__.py `_install_codex_hook()` graphify-8/graphify/__main__.py `_install_kilo_plugin()` graphify-8/graphify/__main__.py +2 more	`_amp_install()` graphify-8/graphify/__main__.py `_kilo_install()` graphify-8/graphify/__main__.py `_project_install()` graphify-8/graphify/__main__.py +1 more	_agents_install() node in graphify-8/graphify/__main__.py.
26	`_project_install()` graphify-8/graphify/__main__.py	Function	`_agents_install()` graphify-8/graphify/__main__.py `_antigravity_finalize()` graphify-8/graphify/__main__.py `_copy_skill_file()` graphify-8/graphify/__main__.py +6 more	`claude_install()` graphify-8/graphify/__main__.py `main()` graphify-8/graphify/__main__.py	_project_install() node in graphify-8/graphify/__main__.py.
27	`_kilo_uninstall_global()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`_kilo_uninstall()` graphify-8/graphify/__main__.py	_kilo_uninstall_global() node in graphify-8/graphify/__main__.py.
28	`_kilo_install()` graphify-8/graphify/__main__.py	Function	`_agents_install()` graphify-8/graphify/__main__.py `install()` graphify-8/graphify/__main__.py	`main()` graphify-8/graphify/__main__.py	_kilo_install() node in graphify-8/graphify/__main__.py.
29	`_clone_repo()` graphify-8/graphify/__main__.py	Function	External entry / no inbound edge	`main()` graphify-8/graphify/__main__.py	Turns a local path or remote repository into analysis context.
30	`Read a packaged always-on instruction block from graphify/always_on/. The s` graphify-8/graphify/__main__.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Read a packaged always-on instruction block from graphify/always_on/. The s.

Key Files

File	Coverage
`graphify-8/graphify/__main__.py`	115 nodes
`graphify-8/tests/test_install.py`	36 nodes
`graphify-8/graphify/llm.py`	29 nodes
`graphify-8/tests/test_claude_md.py`	26 nodes
`graphify/skill.md`	12 nodes
`fragments/core/core.md`	7 nodes
`graphify/skill-aider.md`	5 nodes
`amp/references/extraction-spec.md`	5 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x311, calls x167, explains x91, contains x73. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

7. Ingestion & Updates

Ingestion & Updates groups implementation around graphify, worked, manifestjson, siege, mostly in worked/rsl-siege-manager/manifest.json, graphify-8/graphify/watch.py, graphify-8/tests/test_transcribe.py. This section covers 779 nodes and 952 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Ingestion & Updates (779 nodes, 952 edges) subgraph ingest_cache_update_graphify_8_graphify_cache_py_39358958["graphify-8/graphify/cache.py"] graphify_cache_stat_index_file_d613bdb6("_stat_index_file()
graphify-8/graphify/cache.py") graphify_cache_ensure_stat_index_1f4737bc("_ensure_stat_index()
graphify-8/graphify/cache.py") graphify_cache_flush_stat_index_7b2b43d2("_flush_stat_index()
graphify-8/graphify/cache.py") graphify_cache_file_hash_fc3ef9d2("file_hash()
graphify-8/graphify/cache.py") graphify_cache_normalize_path_1ceb9406("_normalize_path()
graphify-8/graphify/cache.py") graphify_cache_load_cached_7df6fb71("load_cached()
graphify-8/graphify/cache.py") graphify_cache_absolutize_source_files_in_d190960a("source files in()
graphify-8/graphify/cache.py") graphify_cache_cache_dir_a404ca32("cache_dir()
graphify-8/graphify/cache.py") graphify_cache_check_semantic_cache_aa67d073("check_semantic_cache()
graphify-8/graphify/cache.py") end subgraph ingest_cache_update_graphify_8_graphify_detect_p_7ef9dec8["graphify-8/graphify/detect.py"] graphify_detect_file_within_size_cap_cbe997b7("_file_within_size_cap()
graphify-8/graphify/detect.py") graphify_detect_extract_pdf_text_597920d5("extract_pdf_text()
graphify-8/graphify/detect.py") end subgraph ingest_cache_update_graphify_8_graphify_ingest_p_c9bfcd25["graphify-8/graphify/ingest.py"] graphify_ingest_safe_filename_0367cf63("_safe_filename()
graphify-8/graphify/ingest.py") graphify_ingest_yaml_str_63467bbc("_yaml_str()
graphify-8/graphify/ingest.py") end graphify_mcp_ingest_emit_server_02885c8f("_emit_server()
graphify-8/graphify/mcp_ingest.py") graphify_transcribe_build_whisper_prompt_ffd4e298("build_whisper_prompt()
graphify-8/graphify/transcribe.py") graphify_watch_check_update_e7eb11c9("check_update()
graphify-8/graphify/watch.py") tests_test_cache_test_load_cached_passes_through_a21af82b("absolute source file()
graphify-8/tests/test_cache.py") raw_models_url_440d1a72("URL
httpx/raw/models.py") graphify_cache_stat_index_file_d613bdb6 -->|calls| graphify_cache_ensure_stat_index_1f4737bc graphify_cache_stat_index_file_d613bdb6 -->|calls| graphify_cache_flush_stat_index_7b2b43d2 graphify_cache_ensure_stat_index_1f4737bc -->|calls| graphify_cache_file_hash_fc3ef9d2 graphify_cache_normalize_path_1ceb9406 -->|calls| graphify_cache_file_hash_fc3ef9d2 graphify_cache_file_hash_fc3ef9d2 -->|calls| graphify_cache_load_cached_7df6fb71 graphify_cache_file_hash_fc3ef9d2 -->|calls| tests_test_cache_test_load_cached_passes_through_a21af82b graphify_cache_absolutize_source_files_in_d190960a -->|calls| graphify_cache_load_cached_7df6fb71 graphify_cache_cache_dir_a404ca32 -->|calls| graphify_cache_load_cached_7df6fb71 graphify_cache_cache_dir_a404ca32 -->|calls| tests_test_cache_test_load_cached_passes_through_a21af82b graphify_cache_load_cached_7df6fb71 -->|calls| graphify_cache_check_semantic_cache_aa67d073 graphify_cache_load_cached_7df6fb71 -->|calls| tests_test_cache_test_load_cached_passes_through_a21af82b graphify_detect_file_within_size_cap_cbe997b7 -->|calls| graphify_detect_extract_pdf_text_597920d5 %% Omitted for readability: 761 nodes, 0 edges class graphify_cache_stat_index_file_d613bdb6 function; class graphify_cache_ensure_stat_index_1f4737bc function; class graphify_cache_flush_stat_index_7b2b43d2 function; class graphify_cache_file_hash_fc3ef9d2 function; class graphify_cache_normalize_path_1ceb9406 function; class graphify_cache_load_cached_7df6fb71 function; class graphify_cache_absolutize_source_files_in_d190960a function; class graphify_cache_cache_dir_a404ca32 function; class graphify_cache_check_semantic_cache_aa67d073 function; class graphify_detect_file_within_size_cap_cbe997b7 function; class graphify_detect_extract_pdf_text_597920d5 function; class graphify_ingest_safe_filename_0367cf63 function; class graphify_ingest_yaml_str_63467bbc function; class graphify_mcp_ingest_emit_server_02885c8f function; class graphify_transcribe_build_whisper_prompt_ffd4e298 function; class graphify_watch_check_update_e7eb11c9 function; class tests_test_cache_test_load_cached_passes_through_a21af82b test; class raw_models_url_440d1a72 klass; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`transcribe.py` graphify-8/graphify/transcribe.py	Module	External entry / no inbound edge	`test_transcribe.py` graphify-8/tests/test_transcribe.py	Module file in graphify-8/graphify/transcribe.py.
2	`_model_name()` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	`transcribe()` graphify-8/graphify/transcribe.py	_model_name() node in graphify-8/graphify/transcribe.py.
3	`str` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/graphify/transcribe.py.
4	`_get_whisper()` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	`transcribe()` graphify-8/graphify/transcribe.py	_get_whisper() node in graphify-8/graphify/transcribe.py.
5	`_get_yt_dlp()` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	`download_audio()` graphify-8/graphify/transcribe.py	_get_yt_dlp() node in graphify-8/graphify/transcribe.py.
6	`is_url()` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	`transcribe()` graphify-8/graphify/transcribe.py	is_url() node in graphify-8/graphify/transcribe.py.
7	`bool` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	No direct outbound edge	bool node in graphify-8/graphify/transcribe.py.
8	`download_audio()` graphify-8/graphify/transcribe.py	Function	`_get_yt_dlp()` graphify-8/graphify/transcribe.py `ingest()` graphify-8/graphify/ingest.py	`transcribe()` graphify-8/graphify/transcribe.py	download_audio() node in graphify-8/graphify/transcribe.py.
9	`Path` graphify-8/graphify/transcribe.py	Class	External entry / no inbound edge	No direct outbound edge	Path node in graphify-8/graphify/transcribe.py.
10	`build_whisper_prompt()` graphify-8/graphify/transcribe.py	Function	External entry / no inbound edge	`nodes without labels()` graphify-8/tests/test_transcribe.py `prompt env override()` graphify-8/tests/test_transcribe.py `prompt no nodes()` graphify-8/tests/test_transcribe.py +1 more	Builds structured prompts for model calls.
11	`transcribe()` graphify-8/graphify/transcribe.py	Function	`_get_whisper()` graphify-8/graphify/transcribe.py `_model_name()` graphify-8/graphify/transcribe.py `download_audio()` graphify-8/graphify/transcribe.py +1 more	`missing faster whisper()` graphify-8/tests/test_transcribe.py `test_transcribe_uses_cache()` graphify-8/tests/test_transcribe.py `transcribe force reruns()` graphify-8/tests/test_transcribe.py +1 more	transcribe() node in graphify-8/graphify/transcribe.py.
12	`transcribe_all()` graphify-8/graphify/transcribe.py	Function	`transcribe()` graphify-8/graphify/transcribe.py	`all skips failed()` graphify-8/tests/test_transcribe.py `all uses cache()` graphify-8/tests/test_transcribe.py `test_transcribe_all_empty()` graphify-8/tests/test_transcribe.py	transcribe_all() node in graphify-8/graphify/transcribe.py.
13	`Return True if the string looks like a URL rather than a file path.` graphify-8/graphify/transcribe.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return True if the string looks like a URL rather than a file path..
14	`Download audio-only stream from a URL using yt-dlp. Returns the path to the` graphify-8/graphify/transcribe.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Download audio-only stream from a URL using yt-dlp. Returns the path to the.
15	`Build a domain hint for Whisper from god nodes extracted from the corpus. F` graphify-8/graphify/transcribe.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Build a domain hint for Whisper from god nodes extracted from the corpus. F.
16	`Transcribe a video/audio file or URL to a .txt transcript. If video_path is` graphify-8/graphify/transcribe.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Transcribe a video/audio file or URL to a .txt transcript. If video_path is.
17	`Transcribe a list of video/audio files or URLs, return paths to transcript .txt` graphify-8/graphify/transcribe.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Transcribe a list of video/audio files or URLs, return paths to transcript .txt.
18	`test_transcribe.py` graphify-8/tests/test_transcribe.py	Test	`transcribe.py` graphify-8/graphify/transcribe.py	No direct outbound edge	Module file in graphify-8/tests/test_transcribe.py.
19	`test_video_extensions_set()` graphify-8/tests/test_transcribe.py	Test	External entry / no inbound edge	No direct outbound edge	Verifies imports, entry points, or version behavior.
20	`test_build_whisper_prompt_no_nodes()` graphify-8/tests/test_transcribe.py	Test	`build_whisper_prompt()` graphify-8/graphify/transcribe.py	No direct outbound edge	Builds structured prompts for model calls.
21	`test_build_whisper_prompt_env_override()` graphify-8/tests/test_transcribe.py	Test	`build_whisper_prompt()` graphify-8/graphify/transcribe.py	No direct outbound edge	Builds structured prompts for model calls.
22	`test_build_whisper_prompt_returns_topic_string()` graphify-8/tests/test_transcribe.py	Test	`build_whisper_prompt()` graphify-8/graphify/transcribe.py	No direct outbound edge	Builds structured prompts for model calls.
23	`test_build_whisper_prompt_nodes_without_labels()` graphify-8/tests/test_transcribe.py	Test	`build_whisper_prompt()` graphify-8/graphify/transcribe.py	No direct outbound edge	Builds structured prompts for model calls.
24	`test_transcribe_uses_cache()` graphify-8/tests/test_transcribe.py	Test	`transcribe()` graphify-8/graphify/transcribe.py	No direct outbound edge	Caches analysis results or computes cache keys.
25	`test_transcribe_force_reruns()` graphify-8/tests/test_transcribe.py	Test	`transcribe()` graphify-8/graphify/transcribe.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
26	`test_transcribe_missing_faster_whisper()` graphify-8/tests/test_transcribe.py	Test	`transcribe()` graphify-8/graphify/transcribe.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
27	`test_transcribe_all_empty()` graphify-8/tests/test_transcribe.py	Test	`transcribe_all()` graphify-8/graphify/transcribe.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
28	`test_transcribe_all_uses_cache()` graphify-8/tests/test_transcribe.py	Test	`transcribe_all()` graphify-8/graphify/transcribe.py	No direct outbound edge	Caches analysis results or computes cache keys.
29	`test_transcribe_all_skips_failed()` graphify-8/tests/test_transcribe.py	Test	`transcribe_all()` graphify-8/graphify/transcribe.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
30	`Tests for graphify.transcribe — video/audio transcription support.` graphify-8/tests/test_transcribe.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Tests for graphify.transcribe — video/audio transcription support..

Key Files

File	Coverage
`worked/rsl-siege-manager/manifest.json`	478 nodes
`graphify-8/graphify/watch.py`	26 nodes
`graphify-8/tests/test_transcribe.py`	23 nodes
`graphify-8/graphify/cache.py`	22 nodes
`graphify-8/graphify/ingest.py`	22 nodes
`graphify-8/graphify/mcp_ingest.py`	20 nodes
`graphify-8/graphify/google_workspace.py`	19 nodes
`graphify-8/graphify/transcribe.py`	17 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: contains x558, references x208, calls x86, explains x71. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

8. Serving API

Serving API groups implementation around graphify, worked, raw, httpx, mostly in httpx/raw/exceptions.py, httpx/raw/transport.py, httpx/raw/models.py. This section covers 276 nodes and 586 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Serving API (276 nodes, 586 edges) subgraph serve_api_graphify_8_graphify_llm_py_81d6cd17["graphify-8/graphify/llm.py"] graphify_llm_custom_providers_path_9cf895db("_custom_providers_path()
graphify-8/graphify/llm.py") graphify_llm_load_custom_providers_9fbc775a("_load_custom_providers()
graphify-8/graphify/llm.py") graphify_llm_provider_base_url_ok_5ffa7687("provider_base_url_ok()
graphify-8/graphify/llm.py") graphify_llm_backend_env_keys_340dc2f0("_backend_env_keys()
graphify-8/graphify/llm.py") graphify_llm_format_backend_env_keys_4438ae9c("_format_backend_env_keys()
graphify-8/graphify/llm.py") graphify_llm_get_backend_api_key_06edfb9c("_get_backend_api_key()
graphify-8/graphify/llm.py") graphify_llm_call_llm_134e33ba("_call_llm()
graphify-8/graphify/llm.py") graphify_llm_default_model_for_backend_d92bd81e("_default_model_for_backend()
graphify-8/graphify/llm.py") end subgraph serve_api_httpx_raw_models_py_9e1b4ef5["httpx/raw/models.py"] raw_models_cookies_70c4801b("Cookies
httpx/raw/models.py") raw_models_response_10ba751b("Response
httpx/raw/models.py") raw_models_headers_9cba1eac("Headers
httpx/raw/models.py") end subgraph serve_api_graphify_8_graphify_serve_py_a6d4ac19["graphify-8/graphify/serve.py"] graphify_serve_communities_from_graph_9b824063("_communities_from_graph()
graphify-8/graphify/serve.py") graphify_serve_serve_c2ce7f25("serve()
graphify-8/graphify/serve.py") end subgraph serve_api_graphify_8_tests_test_serve_py_4a99fb39["graphify-8/tests/test_serve.py"] tests_test_serve_test_communities_from_graph_bas_0b13c566("from graph basic()
graphify-8/tests/test_serve.py") tests_test_serve_test_communities_from_graph_iso_7dc94d54("from graph isolated()
graphify-8/tests/test_serve.py") end subgraph serve_api_httpx_raw_client_py_c992cbbb["httpx/raw/client.py"] raw_client_client_4963c47a("Client
httpx/raw/client.py") raw_client_asyncclient_e85621c8("AsyncClient
httpx/raw/client.py") end raw_storage_ensure_storage_ee51d11d("_ensure_storage()
example/raw/storage.py") graphify_llm_custom_providers_path_9cf895db -->|calls| graphify_llm_load_custom_providers_9fbc775a graphify_llm_provider_base_url_ok_5ffa7687 -->|calls| graphify_llm_load_custom_providers_9fbc775a graphify_llm_backend_env_keys_340dc2f0 -->|calls| graphify_llm_format_backend_env_keys_4438ae9c graphify_llm_backend_env_keys_340dc2f0 -->|calls| graphify_llm_get_backend_api_key_06edfb9c graphify_llm_get_backend_api_key_06edfb9c -->|calls| graphify_llm_call_llm_134e33ba graphify_llm_format_backend_env_keys_4438ae9c -->|calls| graphify_llm_call_llm_134e33ba graphify_llm_default_model_for_backend_d92bd81e -->|calls| graphify_llm_call_llm_134e33ba graphify_serve_communities_from_graph_9b824063 -->|calls| graphify_serve_serve_c2ce7f25 graphify_serve_communities_from_graph_9b824063 -->|calls| tests_test_serve_test_communities_from_graph_bas_0b13c566 graphify_serve_communities_from_graph_9b824063 -->|calls| tests_test_serve_test_communities_from_graph_iso_7dc94d54 %% Omitted for readability: 258 nodes, 0 edges class graphify_llm_custom_providers_path_9cf895db function; class graphify_llm_load_custom_providers_9fbc775a function; class graphify_llm_provider_base_url_ok_5ffa7687 function; class graphify_llm_backend_env_keys_340dc2f0 function; class graphify_llm_format_backend_env_keys_4438ae9c function; class graphify_llm_get_backend_api_key_06edfb9c api; class graphify_llm_call_llm_134e33ba function; class graphify_llm_default_model_for_backend_d92bd81e function; class raw_models_cookies_70c4801b klass; class raw_models_response_10ba751b klass; class raw_models_headers_9cba1eac klass; class graphify_serve_communities_from_graph_9b824063 function; class graphify_serve_serve_c2ce7f25 function; class tests_test_serve_test_communities_from_graph_bas_0b13c566 test; class tests_test_serve_test_communities_from_graph_iso_7dc94d54 test; class raw_client_client_4963c47a entry; class raw_client_asyncclient_e85621c8 entry; class raw_storage_ensure_storage_ee51d11d function; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`TransportError` httpx/raw/exceptions.py	Class	External entry / no inbound edge	`AsyncBaseTransport` httpx/raw/transport.py `BaseTransport` httpx/raw/transport.py `ConnectionPool` httpx/raw/transport.py +7 more	TransportError node in httpx/raw/exceptions.py.
2	`TimeoutException` httpx/raw/exceptions.py	Class	External entry / no inbound edge	`AsyncBaseTransport` httpx/raw/transport.py `BaseTransport` httpx/raw/transport.py `ConnectionPool` httpx/raw/transport.py +6 more	TimeoutException node in httpx/raw/exceptions.py.
3	`NetworkError` httpx/raw/exceptions.py	Class	External entry / no inbound edge	No direct outbound edge	NetworkError node in httpx/raw/exceptions.py.
4	`ConnectError` httpx/raw/exceptions.py	Class	External entry / no inbound edge	`AsyncBaseTransport` httpx/raw/transport.py `BaseTransport` httpx/raw/transport.py `ConnectionPool` httpx/raw/transport.py +7 more	ConnectError node in httpx/raw/exceptions.py.
5	`An error occurred at the transport layer.` httpx/raw/exceptions.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for An error occurred at the transport layer..
6	`A network error occurred.` httpx/raw/exceptions.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for A network error occurred..
7	`Failed to establish a connection.` httpx/raw/exceptions.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Failed to establish a connection..
8	`Request` httpx/raw/models.py	Class	`AsyncClient` httpx/raw/client.py `Auth` httpx/raw/auth.py `BasicAuth` httpx/raw/auth.py +11 more	`__init__()` httpx/raw/models.py `AsyncBaseTransport` httpx/raw/transport.py `BaseTransport` httpx/raw/transport.py +7 more	Request node in httpx/raw/models.py.
9	`transport.py` httpx/raw/transport.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in httpx/raw/transport.py.
10	`BaseTransport` httpx/raw/transport.py	Class	`AsyncClient` httpx/raw/client.py `Client` httpx/raw/client.py `ConnectError` httpx/raw/exceptions.py +7 more	`close()` httpx/raw/transport.py `handle_request()` httpx/raw/transport.py	BaseTransport node in httpx/raw/transport.py.
11	`.handle_request()` httpx/raw/transport.py	Function	`BaseTransport` httpx/raw/transport.py	No direct outbound edge	.handle_request() node in httpx/raw/transport.py.
12	`Request` httpx/raw/transport.py	Class	`ConnectError` httpx/raw/exceptions.py `Request` httpx/raw/models.py `Response` httpx/raw/models.py +2 more	No direct outbound edge	Request node in httpx/raw/transport.py.
13	`Response` httpx/raw/transport.py	Class	`ConnectError` httpx/raw/exceptions.py `Request` httpx/raw/models.py `Response` httpx/raw/models.py +2 more	No direct outbound edge	Response node in httpx/raw/transport.py.
14	`.close()` httpx/raw/transport.py	Function	`BaseTransport` httpx/raw/transport.py	No direct outbound edge	.close() node in httpx/raw/transport.py.
15	`AsyncBaseTransport` httpx/raw/transport.py	Async	`ConnectError` httpx/raw/exceptions.py `Request` httpx/raw/models.py `Response` httpx/raw/models.py +2 more	`aclose()` httpx/raw/transport.py `handle_async_request()` httpx/raw/transport.py	AsyncBaseTransport node in httpx/raw/transport.py.
16	`.handle_async_request()` httpx/raw/transport.py	Async	`AsyncBaseTransport` httpx/raw/transport.py	No direct outbound edge	.handle_async_request() node in httpx/raw/transport.py.
17	`.aclose()` httpx/raw/transport.py	Function	`AsyncBaseTransport` httpx/raw/transport.py	No direct outbound edge	.aclose() node in httpx/raw/transport.py.
18	`ConnectionPool` httpx/raw/transport.py	Class	`ConnectError` httpx/raw/exceptions.py `Request` httpx/raw/models.py `Response` httpx/raw/models.py +2 more	`__init__()` httpx/raw/transport.py `__init__()` httpx/raw/transport.py `_get_connection_key()` httpx/raw/transport.py +3 more	ConnectionPool node in httpx/raw/transport.py.
19	`.__init__()` httpx/raw/transport.py	Function	`ConnectionPool` httpx/raw/transport.py	No direct outbound edge	.__init__() node in httpx/raw/transport.py.
20	`._get_connection_key()` httpx/raw/transport.py	Function	`ConnectionPool` httpx/raw/transport.py	`get_connection()` httpx/raw/transport.py `return_connection()` httpx/raw/transport.py	._get_connection_key() node in httpx/raw/transport.py.
21	`.get_connection()` httpx/raw/transport.py	Function	`_get_connection_key()` httpx/raw/transport.py `ConnectionPool` httpx/raw/transport.py	`handle_request()` httpx/raw/transport.py	.get_connection() node in httpx/raw/transport.py.
22	`.return_connection()` httpx/raw/transport.py	Function	`_get_connection_key()` httpx/raw/transport.py `ConnectionPool` httpx/raw/transport.py	`handle_request()` httpx/raw/transport.py	.return_connection() node in httpx/raw/transport.py.
23	`.close()` httpx/raw/transport.py	Function	`ConnectionPool` httpx/raw/transport.py	No direct outbound edge	.close() node in httpx/raw/transport.py.
24	`HTTPTransport` httpx/raw/transport.py	Class	`AsyncClient` httpx/raw/client.py `Client` httpx/raw/client.py `ConnectError` httpx/raw/exceptions.py +7 more	`__init__()` httpx/raw/transport.py `__init__()` httpx/raw/transport.py `_send()` httpx/raw/transport.py +2 more	HTTPTransport node in httpx/raw/transport.py.
25	`.__init__()` httpx/raw/transport.py	Function	`ConnectionPool` httpx/raw/transport.py `HTTPTransport` httpx/raw/transport.py	No direct outbound edge	.__init__() node in httpx/raw/transport.py.
26	`.handle_request()` httpx/raw/transport.py	Function	`ConnectError` httpx/raw/exceptions.py `get_connection()` httpx/raw/transport.py `HTTPTransport` httpx/raw/transport.py +1 more	`_send()` httpx/raw/transport.py	.handle_request() node in httpx/raw/transport.py.
27	`._send()` httpx/raw/transport.py	Function	`handle_request()` httpx/raw/transport.py `HTTPTransport` httpx/raw/transport.py	No direct outbound edge	._send() node in httpx/raw/transport.py.
28	`.close()` httpx/raw/transport.py	Function	`HTTPTransport` httpx/raw/transport.py	`close()` httpx/raw/transport.py	.close() node in httpx/raw/transport.py.
29	`.handle_async_request()` httpx/raw/transport.py	Async	External entry / no inbound edge	No direct outbound edge	.handle_async_request() node in httpx/raw/transport.py.
30	`MockTransport` httpx/raw/transport.py	Class	`ConnectError` httpx/raw/exceptions.py `Request` httpx/raw/models.py `Response` httpx/raw/models.py +2 more	`__init__()` httpx/raw/transport.py `handle_request()` httpx/raw/transport.py	MockTransport node in httpx/raw/transport.py.

Key Files

File	Coverage
`httpx/raw/exceptions.py`	40 nodes
`httpx/raw/transport.py`	36 nodes
`graphify-8/graphify/serve.py`	31 nodes
`httpx/raw/models.py`	31 nodes
`httpx/raw/client.py`	30 nodes
`httpx/raw/auth.py`	28 nodes
`graphify-8/graphify/llm.py`	19 nodes
`example/raw/storage.py`	19 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x114, calls x87, contains x81, explains x79. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

9. Security & Global Graph

Security & Global Graph groups implementation around graphify, genpy, tools, skillgen, mostly in tools/skillgen/gen.py, graphify-8/graphify/global_graph.py, graphify-8/graphify/security.py. This section covers 117 nodes and 223 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Security & Global Graph (117 nodes, 223 edges) subgraph security_global_graphify_8_graphify_global_graph_91e9a205["graphify-8/graphify/global_graph.py"] graphify_global_graph_load_manifest_b04b53b2("_load_manifest()
graphify-8/graphify/global_graph.py") graphify_global_graph_global_add_ed811d7a("global_add()
graphify-8/graphify/global_graph.py") graphify_global_graph_global_list_966c6ad5("global_list()
graphify-8/graphify/global_graph.py") graphify_global_graph_global_remove_87d82d5d("global_remove()
graphify-8/graphify/global_graph.py") graphify_global_graph_save_manifest_1760c568("_save_manifest()
graphify-8/graphify/global_graph.py") graphify_global_graph_load_global_graph_45c88249("_load_global_graph()
graphify-8/graphify/global_graph.py") graphify_global_graph_save_global_graph_c1e6e0c8("_save_global_graph()
graphify-8/graphify/global_graph.py") graphify_global_graph_file_hash_7bbcce52("_file_hash()
graphify-8/graphify/global_graph.py") end subgraph security_global_graphify_8_graphify_security_py_a227977b["graphify-8/graphify/security.py"] graphify_security_sanitize_label_99768819("sanitize_label()
graphify-8/graphify/security.py") graphify_security_validate_graph_path_d1468a64("validate_graph_path()
graphify-8/graphify/security.py") graphify_security_nofileredirecthandler_cd30f850("_NoFileRedirectHandler
graphify-8/graphify/security.py") graphify_security_nofileredirecthandler_redirect_7c32cc59("redirect_request()
graphify-8/graphify/security.py") end subgraph security_global_graphify_8_tests_test_security_p_5ad54df9["graphify-8/tests/test_security.py"] tests_test_security_test_validate_graph_path_all_f6ef7273("allows inside base()
graphify-8/tests/test_security.py") tests_test_security_test_validate_graph_path_blo_f64ac721("path blocks traversal()
graphify-8/tests/test_security.py") tests_test_security_test_validate_graph_path_rai_8dc70d59("if file missing()
graphify-8/tests/test_security.py") end subgraph security_global_tools_skillgen_gen_py_4147e198["tools/skillgen/gen.py"] skillgen_gen_read_fragment_252b5c1b("_read_fragment()
tools/skillgen/gen.py") skillgen_gen_git_show_1352d09f("_git_show()
tools/skillgen/gen.py") skillgen_gen_normalise_3e4d0a2e("_normalise()
tools/skillgen/gen.py") end graphify_global_graph_load_manifest_b04b53b2 -->|calls| graphify_global_graph_global_add_ed811d7a graphify_global_graph_load_manifest_b04b53b2 -->|calls| graphify_global_graph_global_list_966c6ad5 graphify_global_graph_load_manifest_b04b53b2 -->|calls| graphify_global_graph_global_remove_87d82d5d graphify_global_graph_save_manifest_1760c568 -->|calls| graphify_global_graph_global_add_ed811d7a graphify_global_graph_save_manifest_1760c568 -->|calls| graphify_global_graph_global_remove_87d82d5d graphify_global_graph_load_global_graph_45c88249 -->|calls| graphify_global_graph_global_add_ed811d7a graphify_global_graph_load_global_graph_45c88249 -->|calls| graphify_global_graph_global_remove_87d82d5d graphify_global_graph_save_global_graph_c1e6e0c8 -->|calls| graphify_global_graph_global_add_ed811d7a graphify_global_graph_save_global_graph_c1e6e0c8 -->|calls| graphify_global_graph_global_remove_87d82d5d graphify_global_graph_file_hash_7bbcce52 -->|calls| graphify_global_graph_global_add_ed811d7a graphify_security_nofileredirecthandler_cd30f850 -->|method| graphify_security_nofileredirecthandler_redirect_7c32cc59 graphify_security_validate_graph_path_d1468a64 -->|calls| tests_test_security_test_validate_graph_path_all_f6ef7273 graphify_security_validate_graph_path_d1468a64 -->|calls| tests_test_security_test_validate_graph_path_blo_f64ac721 graphify_security_validate_graph_path_d1468a64 -->|calls| tests_test_security_test_validate_graph_path_rai_8dc70d59 skillgen_gen_read_fragment_252b5c1b -->|calls| skillgen_gen_normalise_3e4d0a2e %% Omitted for readability: 99 nodes, 0 edges class graphify_global_graph_load_manifest_b04b53b2 function; class graphify_global_graph_global_add_ed811d7a function; class graphify_global_graph_global_list_966c6ad5 function; class graphify_global_graph_global_remove_87d82d5d function; class graphify_global_graph_save_manifest_1760c568 function; class graphify_global_graph_load_global_graph_45c88249 function; class graphify_global_graph_save_global_graph_c1e6e0c8 function; class graphify_global_graph_file_hash_7bbcce52 function; class graphify_security_sanitize_label_99768819 function; class graphify_security_validate_graph_path_d1468a64 function; class graphify_security_nofileredirecthandler_cd30f850 function; class graphify_security_nofileredirecthandler_redirect_7c32cc59 function; class tests_test_security_test_validate_graph_path_all_f6ef7273 test; class tests_test_security_test_validate_graph_path_blo_f64ac721 test; class tests_test_security_test_validate_graph_path_rai_8dc70d59 test; class skillgen_gen_read_fragment_252b5c1b function; class skillgen_gen_git_show_1352d09f function; class skillgen_gen_normalise_3e4d0a2e function; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`gen.py` tools/skillgen/gen.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in tools/skillgen/gen.py.
2	`_v8_baseline_ref()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`audit_coverage()` tools/skillgen/gen.py	_v8_baseline_ref() node in tools/skillgen/gen.py.
3	`str` tools/skillgen/gen.py	Function	External entry / no inbound edge	No direct outbound edge	str node in tools/skillgen/gen.py.
4	`_audit_allowlist()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`audit_coverage()` tools/skillgen/gen.py	_audit_allowlist() node in tools/skillgen/gen.py.
5	`Platform` tools/skillgen/gen.py	Class	External entry / no inbound edge	`hooks_target()` tools/skillgen/gen.py `reference_sources()` tools/skillgen/gen.py	Platform node in tools/skillgen/gen.py.
6	`.reference_sources()` tools/skillgen/gen.py	Function	`Platform` tools/skillgen/gen.py	`audit_coverage()` tools/skillgen/gen.py `render()` tools/skillgen/gen.py	.reference_sources() node in tools/skillgen/gen.py.
7	`.hooks_target()` tools/skillgen/gen.py	UI	`Platform` tools/skillgen/gen.py	No direct outbound edge	.hooks_target() node in tools/skillgen/gen.py.
8	`load_platforms()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`main()` tools/skillgen/gen.py	load_platforms() node in tools/skillgen/gen.py.
9	`_read_fragment()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`_normalise()` tools/skillgen/gen.py `_render_agents_md_hooks()` tools/skillgen/gen.py `_render_core()` tools/skillgen/gen.py +2 more	Supports retrieval-augmented Q&A or streaming chat.
10	`_normalise()` tools/skillgen/gen.py	Function	`_read_fragment()` tools/skillgen/gen.py	`_render_agents_md_hooks()` tools/skillgen/gen.py `_render_core()` tools/skillgen/gen.py `monolith_roundtrip()` tools/skillgen/gen.py	_normalise() node in tools/skillgen/gen.py.
11	`RenderedArtifact` tools/skillgen/gen.py	Class	External entry / no inbound edge	No direct outbound edge	RenderedArtifact node in tools/skillgen/gen.py.
12	`_render_frontmatter()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`_render_core()` tools/skillgen/gen.py	_render_frontmatter() node in tools/skillgen/gen.py.
13	`_render_core()` tools/skillgen/gen.py	Function	`_normalise()` tools/skillgen/gen.py `_read_fragment()` tools/skillgen/gen.py `_render_frontmatter()` tools/skillgen/gen.py	`render()` tools/skillgen/gen.py	_render_core() node in tools/skillgen/gen.py.
14	`_render_agents_md_hooks()` tools/skillgen/gen.py	UI	`_normalise()` tools/skillgen/gen.py `_read_fragment()` tools/skillgen/gen.py	`render()` tools/skillgen/gen.py	_render_agents_md_hooks() node in tools/skillgen/gen.py.
15	`render()` tools/skillgen/gen.py	Function	`_read_fragment()` tools/skillgen/gen.py `_render_agents_md_hooks()` tools/skillgen/gen.py `_render_core()` tools/skillgen/gen.py +1 more	`audit_coverage()` tools/skillgen/gen.py `monolith_roundtrip()` tools/skillgen/gen.py `render_all()` tools/skillgen/gen.py +1 more	render() node in tools/skillgen/gen.py.
16	`render_always_on()` tools/skillgen/gen.py	Function	`_read_fragment()` tools/skillgen/gen.py	`always_on_roundtrip()` tools/skillgen/gen.py `render_all()` tools/skillgen/gen.py	render_always_on() node in tools/skillgen/gen.py.
17	`render_all()` tools/skillgen/gen.py	Function	`render()` tools/skillgen/gen.py `render_always_on()` tools/skillgen/gen.py	`main()` tools/skillgen/gen.py	render_all() node in tools/skillgen/gen.py.
18	`write_artifacts()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`main()` tools/skillgen/gen.py	write_artifacts() node in tools/skillgen/gen.py.
19	`_expected_path()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`bless()` tools/skillgen/gen.py `check()` tools/skillgen/gen.py	_expected_path() node in tools/skillgen/gen.py.
20	`Path` tools/skillgen/gen.py	Class	External entry / no inbound edge	No direct outbound edge	Path node in tools/skillgen/gen.py.
21	`bless()` tools/skillgen/gen.py	Function	`_expected_path()` tools/skillgen/gen.py	`main()` tools/skillgen/gen.py	bless() node in tools/skillgen/gen.py.
22	`check()` tools/skillgen/gen.py	Function	`_expected_path()` tools/skillgen/gen.py	`main()` tools/skillgen/gen.py	check() node in tools/skillgen/gen.py.
23	`headings()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`audit_coverage()` tools/skillgen/gen.py	headings() node in tools/skillgen/gen.py.
24	`_git_show()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`_always_on_constants()` tools/skillgen/gen.py `audit_coverage()` tools/skillgen/gen.py `monolith_roundtrip()` tools/skillgen/gen.py	Turns a local path or remote repository into analysis context.
25	`_v8_available()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`main()` tools/skillgen/gen.py	_v8_available() node in tools/skillgen/gen.py.
26	`bool` tools/skillgen/gen.py	Function	External entry / no inbound edge	No direct outbound edge	bool node in tools/skillgen/gen.py.
27	`audit_coverage()` tools/skillgen/gen.py	Function	`_audit_allowlist()` tools/skillgen/gen.py `_git_show()` tools/skillgen/gen.py `_v8_baseline_ref()` tools/skillgen/gen.py +3 more	`main()` tools/skillgen/gen.py	Supports retrieval-augmented Q&A or streaming chat.
28	`_enum_lines()` tools/skillgen/gen.py	Function	External entry / no inbound edge	No direct outbound edge	_enum_lines() node in tools/skillgen/gen.py.
29	`legacy_enum_lines()` tools/skillgen/gen.py	Function	External entry / no inbound edge	`schema_singleton()` tools/skillgen/gen.py	legacy_enum_lines() node in tools/skillgen/gen.py.
30	`schema_singleton()` tools/skillgen/gen.py	Function	`legacy_enum_lines()` tools/skillgen/gen.py `render()` tools/skillgen/gen.py	`main()` tools/skillgen/gen.py	schema_singleton() node in tools/skillgen/gen.py.

Key Files

File	Coverage
`tools/skillgen/gen.py`	70 nodes
`graphify-8/graphify/global_graph.py`	17 nodes
`graphify-8/graphify/security.py`	13 nodes
`graphify-8/tests/test_security.py`	9 nodes
`ARCHITECTURE.md`	3 nodes
`SECURITY.md`	2 nodes
`graphify-8/tests/test_global_graph.py`	2 nodes
`graphify-8/graphify/validate.py`	1 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x70, calls x60, contains x45, explains x39. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

10. Tests & Fixtures

Tests & Fixtures groups implementation around test, graphify, tests, fixtures, mostly in graphify-8/tests/test_languages.py, graphify-8/tests/test_detect.py, graphify-8/tests/test_scip_ingest.py. This section covers 3382 nodes and 5402 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Tests & Fixtures (3382 nodes, 5402 edges) subgraph tests_fixtures_graphify_8_tests_test_analyze_py_90398e4d["graphify-8/tests/test_analyze.py"] tests_test_analyze_test_find_import_cycles_detec_8d1a9d00("and 3 cycles()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_empty_2f0ba443("cycles empty graph()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_handl_5b64d0ad("undirected graph input()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_ignor_a786fb00("non import relations()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_inclu_7ebc7e45("self loop cycle()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_no_cy_c82d5c4e("cycles no cycles()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_respe_f87bdfe6("max cycle length()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_retur_48235a40("returns structured records()
graphify-8/tests/test_analyze.py") tests_test_analyze_test_find_import_cycles_skips_25db9581("without source file()
graphify-8/tests/test_analyze.py") end subgraph tests_fixtures_graphify_8_graphify_extract_py_459bc007["graphify-8/graphify/extract.py"] graphify_extract_extract_js_ddc4353a("extract_js()
graphify-8/graphify/extract.py") graphify_extract_extract_1f7ed6c4("extract()
graphify-8/graphify/extract.py") end graphify_analyze_find_import_cycles_cfbcbc68("find_import_cycles()
graphify-8/graphify/analyze.py") graphify_cache_body_content_91cd1d71("_body_content()
graphify-8/graphify/cache.py") graphify_scip_ingest_ingest_scip_json_193ec720("ingest_scip_json()
graphify-8/graphify/scip_ingest.py") tests_test_cache_test_body_content_no_frontmatte_6adf2e89("content no frontmatter()
graphify-8/tests/test_cache.py") tests_test_cli_export_run_769e8dc9("_run()
graphify-8/tests/test_cli_export.py") tests_test_import_extension_resolution_write_def6b38b("_write()
graphify-8/tests/test_import_extension_resolution.py") tests_test_languages_labels_04172197("_labels()
graphify-8/tests/test_languages.py") graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_detec_8d1a9d00 graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_empty_2f0ba443 graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_handl_5b64d0ad graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_ignor_a786fb00 graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_inclu_7ebc7e45 graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_no_cy_c82d5c4e graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_respe_f87bdfe6 graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_retur_48235a40 graphify_analyze_find_import_cycles_cfbcbc68 -->|calls| tests_test_analyze_test_find_import_cycles_skips_25db9581 graphify_cache_body_content_91cd1d71 -->|calls| tests_test_cache_test_body_content_no_frontmatte_6adf2e89 %% Omitted for readability: 3364 nodes, 0 edges class tests_test_analyze_test_find_import_cycles_detec_8d1a9d00 test; class tests_test_analyze_test_find_import_cycles_empty_2f0ba443 test; class tests_test_analyze_test_find_import_cycles_handl_5b64d0ad test; class tests_test_analyze_test_find_import_cycles_ignor_a786fb00 test; class tests_test_analyze_test_find_import_cycles_inclu_7ebc7e45 test; class tests_test_analyze_test_find_import_cycles_no_cy_c82d5c4e test; class tests_test_analyze_test_find_import_cycles_respe_f87bdfe6 test; class tests_test_analyze_test_find_import_cycles_retur_48235a40 test; class tests_test_analyze_test_find_import_cycles_skips_25db9581 test; class graphify_extract_extract_js_ddc4353a function; class graphify_extract_extract_1f7ed6c4 function; class graphify_analyze_find_import_cycles_cfbcbc68 function; class graphify_cache_body_content_91cd1d71 function; class graphify_scip_ingest_ingest_scip_json_193ec720 function; class tests_test_cache_test_body_content_no_frontmatte_6adf2e89 test; class tests_test_cli_export_run_769e8dc9 test; class tests_test_import_extension_resolution_write_def6b38b test; class tests_test_languages_labels_04172197 test; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`extract_sql()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`_extract_sql_or_skip()` graphify-8/tests/test_multilang.py	extract_sql() node in graphify-8/graphify/extract.py.
2	`extract_go()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`embedding emits embeds()` graphify-8/tests/test_multilang.py `embeds struct field()` graphify-8/tests/test_multilang.py `emits field context()` graphify-8/tests/test_multilang.py +11 more	extract_go() node in graphify-8/graphify/extract.py.
3	`extract_rust()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	`and generic contexts()` graphify-8/tests/test_multilang.py `calls are extracted()` graphify-8/tests/test_multilang.py `emits field context()` graphify-8/tests/test_multilang.py +9 more	extract_rust() node in graphify-8/graphify/extract.py.
4	`Extract tables, views, functions, and relationships from .sql files via tree-sit` graphify-8/graphify/extract.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Extract tables, views, functions, and relationships from .sql files via tree-sit.
5	`Extract functions, methods, type declarations, and imports from a .go file.` graphify-8/graphify/extract.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Extract functions, methods, type declarations, and imports from a .go file..
6	`Extract functions, structs, enums, traits, impl methods, and use declarations fr` graphify-8/graphify/extract.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Extract functions, structs, enums, traits, impl methods, and use declarations fr.
7	`test_go_receiver_methods_share_type_node()` graphify-8/tests/test_languages.py	Test	`extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
8	`test_go_receiver_uses_pkg_scope()` graphify-8/tests/test_languages.py	Test	`extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
9	`Methods on the same receiver type must share one canonical type node.` graphify-8/tests/test_languages.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Methods on the same receiver type must share one canonical type node..
10	`Type node id should be scoped to directory, not file stem.` graphify-8/tests/test_languages.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Type node id should be scoped to directory, not file stem..
11	`test_multilang.py` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	No direct outbound edge	Module file in graphify-8/tests/test_multilang.py.
12	`_labels()` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	`finds impl methods()` graphify-8/tests/test_multilang.py `test_go_finds_constructor()` graphify-8/tests/test_multilang.py `test_go_finds_methods()` graphify-8/tests/test_multilang.py +6 more	_labels() node in graphify-8/tests/test_multilang.py.
13	`_call_pairs()` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	`test_go_emits_calls()` graphify-8/tests/test_multilang.py `test_rust_emits_calls()` graphify-8/tests/test_multilang.py `test_ts_emits_calls()` graphify-8/tests/test_multilang.py	_call_pairs() node in graphify-8/tests/test_multilang.py.
14	`_confidences()` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	`has extracted calls()` graphify-8/tests/test_multilang.py	_confidences() node in graphify-8/tests/test_multilang.py.
15	`_edges_with_relation()` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	`have call context()` graphify-8/tests/test_multilang.py `have call context()` graphify-8/tests/test_multilang.py `have call context()` graphify-8/tests/test_multilang.py +3 more	_edges_with_relation() node in graphify-8/tests/test_multilang.py.
16	`_normalize_symbol_label()` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	`_edge_labels()` graphify-8/tests/test_multilang.py	_normalize_symbol_label() node in graphify-8/tests/test_multilang.py.
17	`str` graphify-8/tests/test_multilang.py	Test	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/tests/test_multilang.py.
18	`_edge_labels()` graphify-8/tests/test_multilang.py	Test	`_normalize_symbol_label()` graphify-8/tests/test_multilang.py	`and generic contexts()` graphify-8/tests/test_multilang.py `embedding emits embeds()` graphify-8/tests/test_multilang.py `embeds struct field()` graphify-8/tests/test_multilang.py +5 more	_edge_labels() node in graphify-8/tests/test_multilang.py.
19	`test_ts_finds_class()` graphify-8/tests/test_multilang.py	Test	`_labels()` graphify-8/tests/test_multilang.py `extract_js()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
20	`test_ts_finds_methods()` graphify-8/tests/test_multilang.py	Test	`_labels()` graphify-8/tests/test_multilang.py `extract_js()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
21	`test_ts_finds_function()` graphify-8/tests/test_multilang.py	Test	`_labels()` graphify-8/tests/test_multilang.py `extract_js()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
22	`test_ts_emits_calls()` graphify-8/tests/test_multilang.py	Test	`_call_pairs()` graphify-8/tests/test_multilang.py `extract_js()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
23	`test_ts_import_edges_have_import_context()` graphify-8/tests/test_multilang.py	Test	`_edges_with_relation()` graphify-8/tests/test_multilang.py `extract_js()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
24	`test_ts_call_edges_have_call_context()` graphify-8/tests/test_multilang.py	Test	`_edges_with_relation()` graphify-8/tests/test_multilang.py `extract_js()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
25	`test_go_finds_struct()` graphify-8/tests/test_multilang.py	Test	`_labels()` graphify-8/tests/test_multilang.py `extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
26	`test_go_finds_methods()` graphify-8/tests/test_multilang.py	Test	`_labels()` graphify-8/tests/test_multilang.py `extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
27	`test_go_finds_constructor()` graphify-8/tests/test_multilang.py	Test	`_labels()` graphify-8/tests/test_multilang.py `extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
28	`test_go_emits_calls()` graphify-8/tests/test_multilang.py	Test	`_call_pairs()` graphify-8/tests/test_multilang.py `extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
29	`test_go_has_extracted_calls()` graphify-8/tests/test_multilang.py	Test	`_confidences()` graphify-8/tests/test_multilang.py `extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.
30	`test_go_import_edges_have_import_context()` graphify-8/tests/test_multilang.py	Test	`_edges_with_relation()` graphify-8/tests/test_multilang.py `extract_go()` graphify-8/graphify/extract.py	No direct outbound edge	Verifies imports, entry points, or version behavior.

Key Files

File	Coverage
`graphify-8/tests/test_languages.py`	235 nodes
`graphify-8/tests/test_detect.py`	188 nodes
`graphify-8/tests/test_scip_ingest.py`	174 nodes
`graphify-8/tests/test_skillgen.py`	108 nodes
`graphify-8/tests/test_extract.py`	101 nodes
`graphify-8/graphify/extract.py`	89 nodes
`graphify-8/tests/test_analyze.py`	76 nodes
`graphify-8/tests/test_import_extension_resolution.py`	74 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: calls x1882, contains x1870, explains x867, references x427. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

11. Prs

Prs groups implementation around graphify, prspy, render, str, mostly in graphify-8/graphify/prs.py. This section covers 19 nodes and 84 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Prs (19 nodes, 84 edges) graphify_prs_c_cf2902f6("_c()
graphify-8/graphify/prs.py") graphify_prs_dim_89484cd3("dim()
graphify-8/graphify/prs.py") graphify_prs_bold_69121c14("bold()
graphify-8/graphify/prs.py") graphify_prs_red_9892a12f("red()
graphify-8/graphify/prs.py") graphify_prs_green_0dd10119("green()
graphify-8/graphify/prs.py") graphify_prs_yellow_35361b28("yellow()
graphify-8/graphify/prs.py") graphify_prs_cyan_02db62b7("cyan()
graphify-8/graphify/prs.py") graphify_prs_magenta_2c97c523("magenta()
graphify-8/graphify/prs.py") graphify_prs_ci_icon_295112e2("_ci_icon()
graphify-8/graphify/prs.py") graphify_prs_render_conflicts_edb1936d("render_conflicts()
graphify-8/graphify/prs.py") graphify_prs_render_dashboard_e0bca574("render_dashboard()
graphify-8/graphify/prs.py") graphify_prs_status_color_b0606a5b("_status_color()
graphify-8/graphify/prs.py") graphify_prs_cmd_prs_75892b18("cmd_prs()
graphify-8/graphify/prs.py") graphify_prs_triage_with_opus_3a88e037("triage_with_opus()
graphify-8/graphify/prs.py") graphify_prs_render_pr_detail_dec9d0ee("render_pr_detail()
graphify-8/graphify/prs.py") graphify_prs_render_worktrees_53571867("render_worktrees()
graphify-8/graphify/prs.py") graphify_prs_truncate_78ef0e00("_truncate()
graphify-8/graphify/prs.py") graphify_prs_eb82edc6("prs.py") graphify_prs_c_cf2902f6 -->|calls| graphify_prs_bold_69121c14 graphify_prs_c_cf2902f6 -->|calls| graphify_prs_cyan_02db62b7 graphify_prs_c_cf2902f6 -->|calls| graphify_prs_dim_89484cd3 graphify_prs_c_cf2902f6 -->|calls| graphify_prs_green_0dd10119 graphify_prs_c_cf2902f6 -->|calls| graphify_prs_magenta_2c97c523 graphify_prs_c_cf2902f6 -->|calls| graphify_prs_red_9892a12f graphify_prs_c_cf2902f6 -->|calls| graphify_prs_yellow_35361b28 graphify_prs_green_0dd10119 -->|calls| graphify_prs_ci_icon_295112e2 graphify_prs_green_0dd10119 -->|calls| graphify_prs_render_conflicts_edb1936d graphify_prs_green_0dd10119 -->|calls| graphify_prs_render_dashboard_e0bca574 graphify_prs_green_0dd10119 -->|calls| graphify_prs_status_color_b0606a5b graphify_prs_red_9892a12f -->|calls| graphify_prs_ci_icon_295112e2 graphify_prs_red_9892a12f -->|calls| graphify_prs_cmd_prs_75892b18 graphify_prs_red_9892a12f -->|calls| graphify_prs_render_dashboard_e0bca574 graphify_prs_red_9892a12f -->|calls| graphify_prs_status_color_b0606a5b graphify_prs_red_9892a12f -->|calls| graphify_prs_triage_with_opus_3a88e037 graphify_prs_yellow_35361b28 -->|calls| graphify_prs_ci_icon_295112e2 graphify_prs_yellow_35361b28 -->|calls| graphify_prs_render_conflicts_edb1936d graphify_prs_yellow_35361b28 -->|calls| graphify_prs_render_dashboard_e0bca574 graphify_prs_yellow_35361b28 -->|calls| graphify_prs_status_color_b0606a5b graphify_prs_cyan_02db62b7 -->|calls| graphify_prs_render_dashboard_e0bca574 graphify_prs_cyan_02db62b7 -->|calls| graphify_prs_render_pr_detail_dec9d0ee graphify_prs_cyan_02db62b7 -->|calls| graphify_prs_render_worktrees_53571867 graphify_prs_bold_69121c14 -->|calls| graphify_prs_render_conflicts_edb1936d %% Omitted for readability: 1 nodes, 26 edges class graphify_prs_c_cf2902f6 function; class graphify_prs_dim_89484cd3 function; class graphify_prs_bold_69121c14 function; class graphify_prs_red_9892a12f function; class graphify_prs_green_0dd10119 function; class graphify_prs_yellow_35361b28 function; class graphify_prs_cyan_02db62b7 function; class graphify_prs_magenta_2c97c523 function; class graphify_prs_ci_icon_295112e2 function; class graphify_prs_render_conflicts_edb1936d function; class graphify_prs_render_dashboard_e0bca574 function; class graphify_prs_status_color_b0606a5b function; class graphify_prs_cmd_prs_75892b18 function; class graphify_prs_triage_with_opus_3a88e037 function; class graphify_prs_render_pr_detail_dec9d0ee function; class graphify_prs_render_worktrees_53571867 function; class graphify_prs_truncate_78ef0e00 function; class graphify_prs_eb82edc6 module; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`prs.py` graphify-8/graphify/prs.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in graphify-8/graphify/prs.py.
2	`_c()` graphify-8/graphify/prs.py	Function	External entry / no inbound edge	`bold()` graphify-8/graphify/prs.py `cyan()` graphify-8/graphify/prs.py `dim()` graphify-8/graphify/prs.py +4 more	_c() node in graphify-8/graphify/prs.py.
3	`str` graphify-8/graphify/prs.py	Function	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/graphify/prs.py.
4	`green()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	`_ci_icon()` graphify-8/graphify/prs.py `_status_color()` graphify-8/graphify/prs.py `render_conflicts()` graphify-8/graphify/prs.py +1 more	green() node in graphify-8/graphify/prs.py.
5	`red()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	`_ci_icon()` graphify-8/graphify/prs.py `_status_color()` graphify-8/graphify/prs.py `cmd_prs()` graphify-8/graphify/prs.py +2 more	red() node in graphify-8/graphify/prs.py.
6	`yellow()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	`_ci_icon()` graphify-8/graphify/prs.py `_status_color()` graphify-8/graphify/prs.py `render_conflicts()` graphify-8/graphify/prs.py +1 more	yellow() node in graphify-8/graphify/prs.py.
7	`cyan()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	`render_dashboard()` graphify-8/graphify/prs.py `render_pr_detail()` graphify-8/graphify/prs.py `render_worktrees()` graphify-8/graphify/prs.py	cyan() node in graphify-8/graphify/prs.py.
8	`bold()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	`_status_color()` graphify-8/graphify/prs.py `render_conflicts()` graphify-8/graphify/prs.py `render_dashboard()` graphify-8/graphify/prs.py +3 more	bold() node in graphify-8/graphify/prs.py.
9	`dim()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	`_ci_icon()` graphify-8/graphify/prs.py `_status_color()` graphify-8/graphify/prs.py `render_conflicts()` graphify-8/graphify/prs.py +4 more	dim() node in graphify-8/graphify/prs.py.
10	`magenta()` graphify-8/graphify/prs.py	Function	`_c()` graphify-8/graphify/prs.py	No direct outbound edge	magenta() node in graphify-8/graphify/prs.py.
11	`_status_color()` graphify-8/graphify/prs.py	Function	`bold()` graphify-8/graphify/prs.py `dim()` graphify-8/graphify/prs.py `green()` graphify-8/graphify/prs.py +2 more	`render_conflicts()` graphify-8/graphify/prs.py `render_dashboard()` graphify-8/graphify/prs.py `render_pr_detail()` graphify-8/graphify/prs.py +1 more	_status_color() node in graphify-8/graphify/prs.py.
12	`_ci_icon()` graphify-8/graphify/prs.py	Function	`dim()` graphify-8/graphify/prs.py `green()` graphify-8/graphify/prs.py `red()` graphify-8/graphify/prs.py +1 more	`render_dashboard()` graphify-8/graphify/prs.py `render_pr_detail()` graphify-8/graphify/prs.py	_ci_icon() node in graphify-8/graphify/prs.py.
13	`_truncate()` graphify-8/graphify/prs.py	Function	External entry / no inbound edge	`render_conflicts()` graphify-8/graphify/prs.py `render_dashboard()` graphify-8/graphify/prs.py `render_worktrees()` graphify-8/graphify/prs.py	_truncate() node in graphify-8/graphify/prs.py.
14	`render_dashboard()` graphify-8/graphify/prs.py	Function	`_ci_icon()` graphify-8/graphify/prs.py `_status_color()` graphify-8/graphify/prs.py `_truncate()` graphify-8/graphify/prs.py +6 more	`cmd_prs()` graphify-8/graphify/prs.py	render_dashboard() node in graphify-8/graphify/prs.py.
15	`render_worktrees()` graphify-8/graphify/prs.py	Function	`_status_color()` graphify-8/graphify/prs.py `_truncate()` graphify-8/graphify/prs.py `bold()` graphify-8/graphify/prs.py +2 more	`cmd_prs()` graphify-8/graphify/prs.py	render_worktrees() node in graphify-8/graphify/prs.py.
16	`render_conflicts()` graphify-8/graphify/prs.py	Function	`_status_color()` graphify-8/graphify/prs.py `_truncate()` graphify-8/graphify/prs.py `bold()` graphify-8/graphify/prs.py +3 more	`cmd_prs()` graphify-8/graphify/prs.py	render_conflicts() node in graphify-8/graphify/prs.py.
17	`render_pr_detail()` graphify-8/graphify/prs.py	Function	`_ci_icon()` graphify-8/graphify/prs.py `_status_color()` graphify-8/graphify/prs.py `bold()` graphify-8/graphify/prs.py +2 more	`cmd_prs()` graphify-8/graphify/prs.py	render_pr_detail() node in graphify-8/graphify/prs.py.
18	`triage_with_opus()` graphify-8/graphify/prs.py	Function	`bold()` graphify-8/graphify/prs.py `dim()` graphify-8/graphify/prs.py `red()` graphify-8/graphify/prs.py	`cmd_prs()` graphify-8/graphify/prs.py	triage_with_opus() node in graphify-8/graphify/prs.py.
19	`cmd_prs()` graphify-8/graphify/prs.py	Function	`red()` graphify-8/graphify/prs.py `render_conflicts()` graphify-8/graphify/prs.py `render_dashboard()` graphify-8/graphify/prs.py +3 more	No direct outbound edge	cmd_prs() node in graphify-8/graphify/prs.py.

Key Files

File	Coverage
`graphify-8/graphify/prs.py`	19 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: calls x50, contains x17, references x17. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

12. Semantic Cleanup

Semantic Cleanup groups implementation around graphify, semantic, cleanuppy, fragment, mostly in graphify-8/graphify/semantic_cleanup.py. This section covers 16 nodes and 24 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Semantic Cleanup (16 nodes, 24 edges) graphify_semantic_cleanup_sanitize_semantic_frag_b9550ce6("sanitize_semantic_fragment()
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_validate_semantic_frag_e967f37b("validate_semantic_fragment()
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_load_validated_semanti_41092f38("validated semantic fragment()
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_validate_semantic_id_2df28521("_validate_semantic_id()
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_append_rationale_attr_ca7fc90e("_append_rationale_attr()
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_is_sentence_like_ratio_dba2d23e("like rationale label()
graphify-8/graphify/semantic_cleanup.py") graphify_8_graphify_semantic_cleanup_py_path_9be9d186("Path
graphify-8/graphify/semantic_cleanup.py") graphify_8_graphify_semantic_cleanup_py_bool_26d8a234("bool
graphify-8/graphify/semantic_cleanup.py") graphify_8_graphify_semantic_cleanup_py_object_3d5cf5fb("object
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_44655d00("semantic_cleanup.py") graphify_8_graphify_semantic_cleanup_py_str_a00878b5("str
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_rationale_308_6021d865("Append one or more rationale strings to...
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_rationale_160_d86c5075("Clean up a semantic extraction fragment...
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_rationale_121_799e276f("Load and validate a semantic chunk, rej...
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_rationale_287_be823953("Return True if *label* looks like prose...
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_rationale_36_e853a6df("Return validation errors for an untrust...
graphify-8/graphify/semantic_cleanup.py") graphify_semantic_cleanup_validate_semantic_frag_e967f37b -->|calls| graphify_semantic_cleanup_load_validated_semanti_41092f38 graphify_semantic_cleanup_validate_semantic_frag_e967f37b -->|calls| graphify_semantic_cleanup_validate_semantic_id_2df28521 graphify_semantic_cleanup_sanitize_semantic_frag_b9550ce6 -->|calls| graphify_semantic_cleanup_append_rationale_attr_ca7fc90e graphify_semantic_cleanup_sanitize_semantic_frag_b9550ce6 -->|calls| graphify_semantic_cleanup_is_sentence_like_ratio_dba2d23e class graphify_semantic_cleanup_sanitize_semantic_frag_b9550ce6 function; class graphify_semantic_cleanup_validate_semantic_frag_e967f37b function; class graphify_semantic_cleanup_load_validated_semanti_41092f38 function; class graphify_semantic_cleanup_validate_semantic_id_2df28521 function; class graphify_semantic_cleanup_append_rationale_attr_ca7fc90e function; class graphify_semantic_cleanup_is_sentence_like_ratio_dba2d23e function; class graphify_8_graphify_semantic_cleanup_py_path_9be9d186 klass; class graphify_8_graphify_semantic_cleanup_py_bool_26d8a234 function; class graphify_8_graphify_semantic_cleanup_py_object_3d5cf5fb function; class graphify_semantic_cleanup_44655d00 module; class graphify_8_graphify_semantic_cleanup_py_str_a00878b5 function; class graphify_semantic_cleanup_rationale_308_6021d865 concept; class graphify_semantic_cleanup_rationale_160_d86c5075 concept; class graphify_semantic_cleanup_rationale_121_799e276f concept; class graphify_semantic_cleanup_rationale_287_be823953 concept; class graphify_semantic_cleanup_rationale_36_e853a6df concept; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`semantic_cleanup.py` graphify-8/graphify/semantic_cleanup.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in graphify-8/graphify/semantic_cleanup.py.
2	`validate_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	Function	External entry / no inbound edge	`_validate_semantic_id()` graphify-8/graphify/semantic_cleanup.py `validated semantic fragment()` graphify-8/graphify/semantic_cleanup.py	Supports retrieval-augmented Q&A or streaming chat.
3	`object` graphify-8/graphify/semantic_cleanup.py	Function	External entry / no inbound edge	No direct outbound edge	object node in graphify-8/graphify/semantic_cleanup.py.
4	`str` graphify-8/graphify/semantic_cleanup.py	Function	External entry / no inbound edge	No direct outbound edge	str node in graphify-8/graphify/semantic_cleanup.py.
5	`load_validated_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	Function	`validate_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	No direct outbound edge	Supports retrieval-augmented Q&A or streaming chat.
6	`Path` graphify-8/graphify/semantic_cleanup.py	Class	External entry / no inbound edge	No direct outbound edge	Path node in graphify-8/graphify/semantic_cleanup.py.
7	`_validate_semantic_id()` graphify-8/graphify/semantic_cleanup.py	Function	`validate_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	No direct outbound edge	_validate_semantic_id() node in graphify-8/graphify/semantic_cleanup.py.
8	`sanitize_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	Function	External entry / no inbound edge	`_append_rationale_attr()` graphify-8/graphify/semantic_cleanup.py `like rationale label()` graphify-8/graphify/semantic_cleanup.py	Supports retrieval-augmented Q&A or streaming chat.
9	`_is_sentence_like_rationale_label()` graphify-8/graphify/semantic_cleanup.py	Function	`sanitize_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	No direct outbound edge	_is_sentence_like_rationale_label() node in graphify-8/graphify/semantic_cleanup.py.
10	`bool` graphify-8/graphify/semantic_cleanup.py	Function	External entry / no inbound edge	No direct outbound edge	bool node in graphify-8/graphify/semantic_cleanup.py.
11	`_append_rationale_attr()` graphify-8/graphify/semantic_cleanup.py	Function	`sanitize_semantic_fragment()` graphify-8/graphify/semantic_cleanup.py	No direct outbound edge	_append_rationale_attr() node in graphify-8/graphify/semantic_cleanup.py.
12	`Return validation errors for an untrusted semantic extraction fragment. Emp` graphify-8/graphify/semantic_cleanup.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return validation errors for an untrusted semantic extraction fragment. Emp.
13	`Load and validate a semantic chunk, rejecting oversize files before parsing.` graphify-8/graphify/semantic_cleanup.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Load and validate a semantic chunk, rejecting oversize files before parsing..
14	`Clean up a semantic extraction fragment in-place. Operations: 1. Remove` graphify-8/graphify/semantic_cleanup.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Clean up a semantic extraction fragment in-place. Operations: 1. Remove.
15	`Return True if label looks like prose / rationale text rather than an enti` graphify-8/graphify/semantic_cleanup.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return True if label looks like prose / rationale text rather than an enti.
16	Append one or more rationale strings to node's ``rationale`` attribute. I graphify-8/graphify/semantic_cleanup.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Append one or more rationale strings to node's ``rationale`` attribute. I.

Key Files

File	Coverage
`graphify-8/graphify/semantic_cleanup.py`	16 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x9, contains x6, explains x5, calls x4. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

13. Attention Notes

Attention Notes groups implementation around attention, worked, mixed, corpus, mostly in mixed-corpus/raw/attention_notes.md, worked/mixed-corpus/review.md. This section covers 14 nodes and 25 internal edges; the diagram shows only representative relationships to stay readable.

%%{init: {"theme": "dark", "themeVariables": {"fontSize": "15.0px", "fontFamily": "Segoe UI, system-ui, sans-serif", "primaryColor": "#1e293b", "primaryTextColor": "#e2e8f0", "primaryBorderColor": "#38bdf8", "secondaryColor": "#0f172a", "tertiaryColor": "#334155", "lineColor": "#64748b", "textColor": "#e2e8f0"}, "flowchart": {"htmlLabels": true, "curve": "basis", "nodeSpacing": 48, "rankSpacing": 64, "padding": 14, "diagramPadding": 10, "useMaxWidth": true}}}%% flowchart LR %% Section: Attention Notes (14 nodes, 25 edges) subgraph attention_notes_mixed_corpus_raw_attention_notes_caa6a691["mixed-corpus/raw/attention_notes.md"] raw_attention_notes_doc_2ba642b5("Attention Mechanism Notes (Transformer,...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_transformer_eb365864("Transformer Architecture
mixed-corpus/raw/attention_notes.md") raw_attention_notes_layer_normalization_54459940("Layer Normalization (per sublayer)
mixed-corpus/raw/attention_notes.md") raw_attention_notes_residual_connection_fc42cd7d("Residual Connection (output = LayerNorm...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_multi_head_attention_d3864ffb("Multi-Head Attention (h=8 heads, d_k=d_...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_vaswani_2017_f07f3994("Vaswani et al. (2017) Attention Is All...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_attention_vs_recurrence_bbe2c812("Why Attention Over Recurrence
mixed-corpus/raw/attention_notes.md") raw_attention_notes_deep_residual_learning_paper_2ec551fa("He et al. (2016) Deep Residual Learning...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_encoder_decoder_stack_9a6c7be3("Encoder-Decoder Stack (6 encoder + 6 de...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_layer_normalization_paper_823c80fe("Ba, Kiros, Hinton (2016) Layer Normaliz...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_positional_encoding_b25582d7("Sinusoidal Positional Encoding
mixed-corpus/raw/attention_notes.md") raw_attention_notes_scaled_dot_product_attention_a4d05e8f("Scaled Dot-Product Attention (softmax(Q...
mixed-corpus/raw/attention_notes.md") raw_attention_notes_wmt_2014_results_13df6cb0("WMT 2014 Results (28.4 BLEU En-De, 41.0...
mixed-corpus/raw/attention_notes.md") end mixed_corpus_review_arabic_ocr_vision_3728a730("Arabic OCR Works Natively via Claude Vi...
worked/mixed-corpus/review.md") mixed_corpus_review_arabic_ocr_vision_3728a730 -->|cites| raw_attention_notes_vaswani_2017_f07f3994 raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_attention_vs_recurrence_bbe2c812 raw_attention_notes_doc_2ba642b5 -->|cites| raw_attention_notes_deep_residual_learning_paper_2ec551fa raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_encoder_decoder_stack_9a6c7be3 raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_layer_normalization_54459940 raw_attention_notes_doc_2ba642b5 -->|cites| raw_attention_notes_layer_normalization_paper_823c80fe raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_multi_head_attention_d3864ffb raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_positional_encoding_b25582d7 raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_residual_connection_fc42cd7d raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_scaled_dot_product_attention_a4d05e8f raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_transformer_eb365864 raw_attention_notes_doc_2ba642b5 -->|cites| raw_attention_notes_vaswani_2017_f07f3994 raw_attention_notes_doc_2ba642b5 -->|references| raw_attention_notes_wmt_2014_results_13df6cb0 raw_attention_notes_transformer_eb365864 -->|relates| raw_attention_notes_attention_vs_recurrence_bbe2c812 raw_attention_notes_transformer_eb365864 -->|relates| raw_attention_notes_encoder_decoder_stack_9a6c7be3 raw_attention_notes_transformer_eb365864 -->|relates| raw_attention_notes_multi_head_attention_d3864ffb raw_attention_notes_transformer_eb365864 -->|relates| raw_attention_notes_positional_encoding_b25582d7 raw_attention_notes_transformer_eb365864 -->|relates| raw_attention_notes_vaswani_2017_f07f3994 raw_attention_notes_transformer_eb365864 -->|relates| raw_attention_notes_wmt_2014_results_13df6cb0 raw_attention_notes_multi_head_attention_d3864ffb -->|relates| raw_attention_notes_scaled_dot_product_attention_a4d05e8f raw_attention_notes_layer_normalization_54459940 -->|relates| raw_attention_notes_encoder_decoder_stack_9a6c7be3 raw_attention_notes_residual_connection_fc42cd7d -->|relates| raw_attention_notes_encoder_decoder_stack_9a6c7be3 raw_attention_notes_layer_normalization_54459940 -->|relates| raw_attention_notes_layer_normalization_paper_823c80fe raw_attention_notes_residual_connection_fc42cd7d -->|relates| raw_attention_notes_deep_residual_learning_paper_2ec551fa %% Omitted for readability: 0 nodes, 1 edges class raw_attention_notes_doc_2ba642b5 klass; class raw_attention_notes_transformer_eb365864 klass; class raw_attention_notes_layer_normalization_54459940 klass; class raw_attention_notes_residual_connection_fc42cd7d klass; class raw_attention_notes_multi_head_attention_d3864ffb klass; class raw_attention_notes_vaswani_2017_f07f3994 klass; class raw_attention_notes_attention_vs_recurrence_bbe2c812 klass; class raw_attention_notes_deep_residual_learning_paper_2ec551fa klass; class raw_attention_notes_encoder_decoder_stack_9a6c7be3 klass; class raw_attention_notes_layer_normalization_paper_823c80fe klass; class raw_attention_notes_positional_encoding_b25582d7 klass; class raw_attention_notes_scaled_dot_product_attention_a4d05e8f klass; class raw_attention_notes_wmt_2014_results_13df6cb0 klass; class mixed_corpus_review_arabic_ocr_vision_3728a730 klass; classDef entry fill:#422006,stroke:#fbbf24,color:#fde68a,stroke-width:1px; classDef api fill:#450a0a,stroke:#f87171,color:#fee2e2,stroke-width:1px; classDef async fill:#2e1065,stroke:#a78bfa,color:#ede9fe,stroke-width:1px; classDef klass fill:#064e3b,stroke:#34d399,color:#d1fae5,stroke-width:1px; classDef ui fill:#831843,stroke:#f472b6,color:#fce7f3,stroke-width:1px; classDef module fill:#172554,stroke:#60a5fa,color:#dbeafe,stroke-width:1px; classDef test fill:#3f3f46,stroke:#a1a1aa,color:#f4f4f5,stroke-width:1px; classDef concept fill:#292524,stroke:#a8a29e,color:#fafaf9,stroke-dasharray:4 3; classDef function fill:#0f172a,stroke:#38bdf8,color:#e0f2fe,stroke-width:1px;

Call Details

#	Node	Type	Caller	Callees	Description
1	`Arabic OCR Works Natively via Claude Vision (10/10)` worked/mixed-corpus/review.md	Class	External entry / no inbound edge	No direct outbound edge	Arabic OCR Works Natively via Claude Vision (10/10) node in worked/mixed-corpus/review.md.
2	`Attention Mechanism Notes (Transformer, Vaswani et al. 2017)` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Attention Mechanism Notes (Transformer, Vaswani et al. 2017) node in mixed-corpus/raw/attention_notes.md.
3	`Transformer Architecture` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Transformer Architecture node in mixed-corpus/raw/attention_notes.md.
4	`Multi-Head Attention (h=8 heads, d_k=d_v=64)` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Multi-Head Attention (h=8 heads, d_k=d_v=64) node in mixed-corpus/raw/attention_notes.md.
5	`Scaled Dot-Product Attention (softmax(QK^T/sqrt(d_k))V)` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Scaled Dot-Product Attention (softmax(QK^T/sqrt(d_k))V) node in mixed-corpus/raw/attention_notes.md.
6	`Sinusoidal Positional Encoding` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Sinusoidal Positional Encoding node in mixed-corpus/raw/attention_notes.md.
7	`Layer Normalization (per sublayer)` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Layer Normalization (per sublayer) node in mixed-corpus/raw/attention_notes.md.
8	`Residual Connection (output = LayerNorm(x + Sublayer(x)))` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Residual Connection (output = LayerNorm(x + Sublayer(x))) node in mixed-corpus/raw/attention_notes.md.
9	`Encoder-Decoder Stack (6 encoder + 6 decoder layers, d_model=512)` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Encoder-Decoder Stack (6 encoder + 6 decoder layers, d_model=512) node in mixed-corpus/raw/attention_notes.md.
10	`Why Attention Over Recurrence` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Why Attention Over Recurrence node in mixed-corpus/raw/attention_notes.md.
11	`WMT 2014 Results (28.4 BLEU En-De, 41.0 BLEU En-Fr, 3.5 days on 8 P100s)` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	WMT 2014 Results (28.4 BLEU En-De, 41.0 BLEU En-Fr, 3.5 days on 8 P100s) node in mixed-corpus/raw/attention_notes.md.
12	`Vaswani et al. (2017) Attention Is All You Need, arXiv:1706.03762` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Vaswani et al. (2017) Attention Is All You Need, arXiv:1706.03762 node in mixed-corpus/raw/attention_notes.md.
13	`Ba, Kiros, Hinton (2016) Layer Normalization, arXiv:1607.06450` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	Ba, Kiros, Hinton (2016) Layer Normalization, arXiv:1607.06450 node in mixed-corpus/raw/attention_notes.md.
14	`He et al. (2016) Deep Residual Learning for Image Recognition, CVPR 2016` mixed-corpus/raw/attention_notes.md	Class	External entry / no inbound edge	No direct outbound edge	He et al. (2016) Deep Residual Learning for Image Recognition, CVPR 2016 node in mixed-corpus/raw/attention_notes.md.

Key Files

File	Coverage
`mixed-corpus/raw/attention_notes.md`	13 nodes
`worked/mixed-corpus/review.md`	1 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: relates x12, references x9, cites x4. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

14. Graphify Always On Agents Md

Graphify Always On Agents Md groups implementation around always, agentsmd, tools, skillgen, mostly in skillgen/expected/graphify__always_on__agents-md.md. This section covers 2 nodes and 1 internal edges; the diagram shows only representative relationships to stay readable.

Call Details

#	Node	Type	Caller	Callees	Description
1	`Golden Snapshot: Always-On AGENTS.md Section` skillgen/expected/graphify__always_on__agents-md.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Golden Snapshot: Always-On AGENTS.md Section.
2	`Generated Always-On AGENTS.md Integration` skillgen/expected/graphify__always_on__agents-md.md	Class	External entry / no inbound edge	No direct outbound edge	Generated Always-On AGENTS.md Integration node in skillgen/expected/graphify__always_on__agents-md.md.

Key Files

File	Coverage
`skillgen/expected/graphify__always_on__agents-md.md`	2 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: references x1. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

15. Graphify Always On Antigravity Rules

Graphify Always On Antigravity Rules groups implementation around always, antigravity, rules, tools, mostly in skillgen/expected/graphify__always_on__antigravity-rules.md. This section covers 2 nodes and 1 internal edges; the diagram shows only representative relationships to stay readable.

Call Details

#	Node	Type	Caller	Callees	Description
1	`Golden Snapshot: Always-On Antigravity Rules` skillgen/expected/graphify__always_on__antigravity-rules.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Golden Snapshot: Always-On Antigravity Rules.
2	`Generated Always-On Antigravity Rules Integration` skillgen/expected/graphify__always_on__antigravity-rules.md	Class	External entry / no inbound edge	No direct outbound edge	Generated Always-On Antigravity Rules Integration node in skillgen/expected/graphify__always_on__antigravity-rules.md.

Key Files

File	Coverage
`skillgen/expected/graphify__always_on__antigravity-rules.md`	2 nodes

Design Notes

16. Other

Other groups implementation around graphify, readme, docs, translations, mostly in graphify-8/graphify/extract.py, httpx/raw/models.py, skillgen/expected/graphify__always_on__gemini-md.md. This section covers 49 nodes and 2 internal edges; the diagram shows only representative relationships to stay readable.

Call Details

#	Node	Type	Caller	Callees	Description
1	`Golden Snapshot: Always-On GEMINI.md Section` skillgen/expected/graphify__always_on__gemini-md.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Golden Snapshot: Always-On GEMINI.md Section.
2	`Generated Always-On GEMINI.md Integration` skillgen/expected/graphify__always_on__gemini-md.md	Class	External entry / no inbound edge	No direct outbound edge	Generated Always-On GEMINI.md Integration node in skillgen/expected/graphify__always_on__gemini-md.md.
3	`_get_tokenizer()` graphify-8/graphify/llm.py	Function	External entry / no inbound edge	No direct outbound edge	_get_tokenizer() node in graphify-8/graphify/llm.py.
4	`Return a tiktoken encoder for accurate token counts, or None if tiktoken is` graphify-8/graphify/llm.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return a tiktoken encoder for accurate token counts, or None if tiktoken is.
5	`.json()` httpx/raw/models.py	Function	External entry / no inbound edge	No direct outbound edge	.json() node in httpx/raw/models.py.
6	`Pre-commit Configuration` .pre-commit-config.yaml	Class	External entry / no inbound edge	No direct outbound edge	Reads, resolves, or persists project configuration.
7	`Ruff Lint Pre-commit Hook` .pre-commit-config.yaml	UI	External entry / no inbound edge	No direct outbound edge	Ruff Lint Pre-commit Hook node in .pre-commit-config.yaml.
8	`__init__.py` tools/skillgen/__init__.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in tools/skillgen/__init__.py.
9	`__init__.py` graphify-8/tests/__init__.py	Test	External entry / no inbound edge	No direct outbound edge	Module file in graphify-8/tests/__init__.py.
10	`__init__.py` graphify-8/tools/__init__.py	Module	External entry / no inbound edge	No direct outbound edge	Module file in graphify-8/tools/__init__.py.
11	`Expected Output: Amp Reference - Exports` skillgen/expected/graphify__skills__amp__references__exports.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Output: Amp Reference - Exports.
12	`Expected Output: Amp Reference - Extraction Spec` skillgen/expected/graphify__skills__amp__references__extraction-spec.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Output: Amp Reference - Extraction Spec.
13	`Expected Output: Amp Reference - Hooks` skillgen/expected/graphify__skills__amp__references__hooks.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Output: Amp Reference - Hooks.
14	`Expected Snapshot: trae skill exports reference` skillgen/expected/graphify__skills__trae__references__exports.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Snapshot: trae skill exports reference.
15	`Expected Snapshot: trae skill extraction-spec reference` skillgen/expected/graphify__skills__trae__references__extraction-spec.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Snapshot: trae skill extraction-spec reference.
16	`Expected Snapshot: trae skill hooks reference` skillgen/expected/graphify__skills__trae__references__hooks.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Snapshot: trae skill hooks reference.
17	`Expected Snapshot: windows skill exports reference` skillgen/expected/graphify__skills__windows__references__exports.md	Concept	External entry / no inbound edge	No direct outbound edge	Documentation node describing Expected Snapshot: windows skill exports reference.
18	`Return the interpreter name from a shebang line. Handles forms that a naive` graphify-8/graphify/detect.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return the interpreter name from a shebang line. Handles forms that a naive.
19	`_import_csharp()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	_import_csharp() node in graphify-8/graphify/extract.py.
20	`_import_kotlin()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	_import_kotlin() node in graphify-8/graphify/extract.py.
21	`_import_php()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	_import_php() node in graphify-8/graphify/extract.py.
22	`_import_scala()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	_import_scala() node in graphify-8/graphify/extract.py.
23	`_import_swift()` graphify-8/graphify/extract.py	Function	External entry / no inbound edge	No direct outbound edge	_import_swift() node in graphify-8/graphify/extract.py.
24	`Resolve a JS/TS module path or specifier to a local source file. With a Pat` graphify-8/graphify/extract.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Resolve a JS/TS module path or specifier to a local source file. With a Pat.
25	`Return a stem qualified with the parent directory name to avoid ID collisions` graphify-8/graphify/extract.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Return a stem qualified with the parent directory name to avoid ID collisions.
26	`Parse an MCP config file into Graphify nodes and edges. Behaviour matches o` graphify-8/graphify/mcp_ingest.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Parse an MCP config file into Graphify nodes and edges. Behaviour matches o.
27	`Convert a SCIP-style JSON document into Graphify nodes and edges. Parameter` graphify-8/graphify/scip_ingest.py	Concept	External entry / no inbound edge	No direct outbound edge	Design note for Convert a SCIP-style JSON document into Graphify nodes and edges. Parameter.
28	`HasName`	Class	External entry / no inbound edge	No direct outbound edge	HasName node in project.
29	`Loggable`	Class	External entry / no inbound edge	No direct outbound edge	Loggable node in project.
30	`.__repr__()` httpx/raw/models.py	Function	External entry / no inbound edge	No direct outbound edge	.__repr__() node in httpx/raw/models.py.

Key Files

File	Coverage
`graphify-8/graphify/extract.py`	7 nodes
`httpx/raw/models.py`	3 nodes
`.pre-commit-config.yaml`	2 nodes
`graphify-8/graphify/llm.py`	2 nodes
`skillgen/expected/graphify__always_on__gemini-md.md`	2 nodes
`docs/translations/README.it-IT.md`	1 nodes
`docs/translations/README.ja-JP.md`	1 nodes
`docs/translations/README.ko-KR.md`	1 nodes

Design Notes

This section comes from graphify community clustering. Relationship summary: explains x1, references x1. The diagram prioritizes high-confidence calls or usage relationships; the table keeps the broader node inventory.

Group Relationships (Hyperedges)

Extraction Pipeline Stages

form — 7 participants

graphify_detect
graphify_extract
graphify_build
graphify_cluster
graphify_analyze
... and 2 more

Security Validation Layer

participate_in — 5 participants

graphify_security
graphify_security_validate_url
graphify_security_safe_fetch
graphify_security_validate_graph_path
graphify_security_sanitize_label

Skillgen Anti-Drift Guard

implement — 3 participants

tools_skillgen
pre_commit_config_skillgen_check
workflows_ci_skillgen_check

Localized README Translation Set

form — 18 participants

graphify
translations_readme_it_it
translations_readme_ja_jp
translations_readme_ko_kr
translations_readme_nl_nl
... and 13 more

Per-Platform Graphify Skill Templates

implement — 6 participants

graphify
graphify_command_kilo
graphify_skill_aider
graphify_skill_amp
graphify_skill_claw
... and 1 more

Per-Platform Graphify Skill Template Family

form — 11 participants

graphify_skill
graphify_skill_copilot
graphify_skill_devin
graphify_skill_droid
graphify_skill_kilo
... and 6 more

Always-On Graph-First Integration Rules

form — 6 participants

always_on_agents_md
always_on_antigravity_rules
always_on_claude_md
always_on_gemini_md
always_on_kiro_steering
... and 1 more

Graphify Build Pipeline Flow

participate_in — 6 participants

graphify_skill_ast_extraction
graphify_skill_semantic_extraction
graphify_skill_extraction_cache
graphify_skill_community_detection
graphify_skill_god_nodes
... and 1 more

Per-Platform Query Reference Doc Copies

form — 3 participants

references_query_amp_doc
references_query_claude_doc
references_query_claw_doc

Project Statistics

Graph

Nodes	6188
Edges	11460
Hyperedges	45
Communities	971
Documented Sections	15

Edge Confidence

EXTRACTED	10828
INFERRED	631
AMBIGUOUS	1

graphify_chase_ai — Architecture Documentation

Generated: 2026-06-06 13:58 UTC · graphify callflow-html